| Protein: | Fsh-PB, Fsh-PA |
| Organism: | Drosophila melanogaster |
| Length: | 831 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fsh-PB, Fsh-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..1] | [831..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MEKHPSLSQR MGTTYRPRKG LKCLSFEFQC RLLLHHLLLT SLSGRHFVYA TSAVGGALSA 60
61 NNCHDIHHGF DVYPNLTAVS LAQSTDTP
|
| Detection Method: |  |
| Confidence: | 6.522879 |
| Match: | 1yrgA |
| Description: | Rna1p (RanGAP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [89-412] |
1 11 21 31 41 51
| | | | | |
1 LTATMPRSAW KCCCWNASNQ AEEVECRCEG DGLNRVPQTL TLPIQRLTIA SAGLPRLRHT 60
61 GLKVYGSTLL DVAFTDCLQL ELIQDGAFAN LTLLRTIYIT NAPKLTFLSK DVFLGISDTV 120
121 DIIRIINSGL TRVPDLGHLP PHNILQMIDL DNNQITRIDS KSIKVKTAQL ILTNNEISYV 180
181 DDSAFFGSKI AKLSLKENKK LQMMHPNAFD GIIDITELDL SSTSLVGLPS AGLQNIEALY 240
241 IQNTHTLKTI PSIYNFRNLQ RAYLTHSFHC CAFQFPSRHD PQRHAQRMLE IEKWRKQCKS 300
301 DSGTRKERST LDNPFNMPED FGSF
|
| Detection Method: | |
| Confidence: | 40.154902 |
| Match: | 1xwdC |
| Description: | Crystal Structure of Human Follicle Stimulating Hormone Complexed with its Receptor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [413-464] |
1 11 21 31 41 51
| | | | | |
1 GGTDDSATDI TPITFASFDY MADDTMNKGT FHEKIILNPG DDSSAELCGN FT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [465-831] |
1 11 21 31 41 51
| | | | | |
1 FRKPNIECYP MPNDLNPCED VMGYQWLRIS VWIVVALAVV GNVAVLTVIL SIRPESTPVP 60
61 RFLMCHLAFA DLCLGLYLLL VACIDAHSMG EYFNFAYDWQ YGLGCKVAGF LTVFASHLSV 120
121 FTLTVITIER WLAITQAMYL NHRIKLRPAA LIMLGGWIYS MLMSSLPLFG ISNYSSTSIC 180
181 LPMENRDVYD TIYLIAILGS NGVAFSIIAV CYAQIYLSLG RETRQAHQNS PGELSVAKKM 240
241 ALLVFTNFAC WSPIAFFGLT ALAGYPLINV TKSKILLVFF YPLNSCADPY LYAILTSQYR 300
301 QDLFTLLSKL GLCQQSALKY KDSLSGQATT RFTIHGSIQR HSSLTCKMQT VMGAETQKML 360
361 KNSEDYV
|
| Detection Method: | |
| Confidence: | 47.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
