| Protein: | mRpS11-PA |
| Organism: | Drosophila melanogaster |
| Length: | 200 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS11-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..1] | [200..1] |
|
|
211.0 | [0..1] | [200..1] |
|
|
193.0 | [0..18] | [200..16] |
|
|
186.0 | [0..13] | [200..19] |
|
|
186.0 | [0..86] | [200..17] |
|
|
185.0 | [0..86] | [200..17] |
|
|
183.0 | [0..73] | [200..2] |
|
|
183.0 | [0..86] | [200..17] |
|
|
183.0 | [0..10] | [200..2] |
|
|
182.0 | [0..86] | [200..17] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MSLKSVFLSA LRSITMPAVP LQTSRIHTSA CWRKAEDRKE MLASLPAKDE GTVGEKTVDI 60
61 DTLINRKAKF FPDASTANT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.760 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.736 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.686 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.617 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.599 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [80-200] |
1 11 21 31 41 51
| | | | | |
1 LFNGIPFNEL PICNIRVSPN NTIISVTDHK GVLRLIRSCG IEGFKNTRKG TNIAAQATAV 60
61 TISGKAIELG WKTVRVKVRG LGPGRMSAIK GLQMGGLNIV SITDNTHVSF NPPRPRKQRS 120
121 L
|
| Detection Method: | |
| Confidence: | 44.69897 |
| Match: | 1vs5K |
| Description: | No description for 1vs5K was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.83351366956976 | bayes_pls_golite062009 |
| structural molecule activity | 9.25292687983044 | bayes_pls_golite062009 |
| RNA binding | 1.52264031918826 | bayes_pls_golite062009 |
| nucleic acid binding | 0.983215686081669 | bayes_pls_golite062009 |
| binding | 0.558121720172199 | bayes_pls_golite062009 |
| rRNA binding | 0.357032493028 | bayes_pls_golite062009 |
| catalytic activity | 0.249767694451989 | bayes_pls_golite062009 |
| translation regulator activity | 0.17520676474539 | bayes_pls_golite062009 |
| protein binding | 0.013467373576568 | bayes_pls_golite062009 |
