| Protein: | CG16941-PA |
| Organism: | Drosophila melanogaster |
| Length: | 784 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG16941-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..22] | [784..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MATLDAEANE EQFGNDQPKS MSGPIIGIIY PPPEVRNIVD KTASFVARNG PEFEARIRQN 60
61 ELGNPKFNFL NGGDPYHAYY RHKVNEFREG NDAGITALAS MKQLAVTSAA QQRQQELLKQ 120
121 VV
|
| Detection Method: |  |
| Confidence: | 23.0 |
| Match: | 2dt6A |
| Description: | No description for 2dt6A was found. |
|
Region A: Residues: [123-276] |
1 11 21 31 41 51
| | | | | |
1 EQQFVPKEPP PEFEFIADPP SISALDLDIV KLTAQFVARN GRQFLTNLMS REQRNFQFDF 60
61 LRPQHSLFQY FTKLLEQYTK VLIPPKDLLG KLRSESAPGR SSMNQVLEQV KYRANWQRHQ 120
121 EAQRRREEEK IERERVAYAQ IDWHDFVVVE TVDY
|
| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 2dt7B |
| Description: | No description for 2dt7B was found. |
|
Region A: Residues: [277-489] |
1 11 21 31 41 51
| | | | | |
1 QPFESGNFPP PTNPDEVGAR VLMEERLMDE EGDTEMQIES DDEGDSQANN LLDSGLKLSQ 60
61 MENRVGIQMK NVSSYGQPTG PKRDNTQVQD MDEASSDEDT PTTKLQPSVA PMLPPTHDKV 120
121 VVKKYDPKAT QPKQAPMPTD EYLISPITGE KIPASKVSEH MRIGLLDPRW VEQRDKHTVE 180
181 KINQDNVFAA GTAIEASLKQ LAERRTDIFG VGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [490-678] |
1 11 21 31 41 51
| | | | | |
1 EETVIGKKLG EEETKKDDRV TWDGHTSSVE AATRAARANI TLEEQIHQIH KVKGLLPDEE 60
61 KEKIGPKPVG NKATLSAPPQ PSTKSQHSHS SQSQHHQGGG GGHHGHHNPH HHHPPHQQAP 120
121 PHQSHHHHPP QQPQPVMQLM QLRPTMMQPP FGAGGGGYMN MQPGGIPQQI APAPPVDIME 180
181 EEPPSKKIR
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [679-784] |
1 11 21 31 41 51
| | | | | |
1 SEDNLIPEAD FIATHKSPVT IQVLVPNSDK SEWKLNGQMI AVTMALSEPI ANLKTKLQDE 60
61 TGMPPAKQKI FYEGMFFKDS NTMAFYNLVN GTTVHLQVKE RGGRKK
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1we7A |
| Description: | Solution structure of Ubiquitin-like domain in SF3a120 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| RNA binding | 2.5865157751042 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9984951714209 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.967509006593 | bayes_pls_golite062009 |
| transcription regulator activity | 1.96195140258726 | bayes_pls_golite062009 |
| protein binding | 1.86841453215444 | bayes_pls_golite062009 |
| DNA binding | 1.68336605464756 | bayes_pls_golite062009 |
| structural molecule activity | 1.52853261170163 | bayes_pls_golite062009 |
| tubulin binding | 1.52077315590062 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.27084865380092 | bayes_pls_golite062009 |
| microtubule binding | 1.2489441153237 | bayes_pls_golite062009 |
