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View Structure Prediction Details

Protein: Gyc-89Da-PC, Gyc...
Organism: Drosophila melanogaster
Length: 667 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gyc-89Da-PC, Gyc....

Description E-value Query
Range
Subject
Range
gi|125776760, gi... - gi|54639128|gb|EAL28530.1| GA13322 [Drosophila pseudoobscura pseudoobscura], gi|125776760|ref|XP_001...
gi|54639128|gb|E... - GA13322-PA [Drosophila pseudoobscura], GA13322 [Drosophila pseudoobscura pseudoobscura]
505.0 [0..1] [667..1]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGMLYESVQ HYVQEEYGVD IWRKVCHIID CKHNSFKTHQ IYPDKLMPDI AEALSACTGE  60
   61 SFDFCMNFFG RCFVRFFSNF GYDKMIRSTG RYFCDFLQSI DNIHLIMRFT YPKMKSPSMQ 120
  121 LTNMDDNGAV ILYRSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.30103
Match: 2o09A
Description: No description for 2o09A was found.

Predicted Domain #2
Region A:
Residues: [137-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTGMSKYLIG QMTEVAREFY GLEIKAYVIE SQNDISGGTA GPIKLTDGPL TVIVKYRLDF  60
   61 DNREYMAKRV NTEAHPSQLK MPTVKLDVFL DLFPFTFVLN HDMKITHAGE KIVETWIMHN 120
  121 PGANPKSFIG THVMDLFQCR RPKDTTIDWD TLIQMRAVLF EFELIRTGHN RAAYDAVLNM 180
  181 DFENYDEMDL NEAQTMALAK AQEFSESHPV DDDESAREDE IDPATGERRS SQGLRSILLK 240
  241 GQMFYIKDVD SLIFLCSPLI ENLDELHGIG LYLNDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2oh4A
Description: No description for 2oh4A was found.

Predicted Domain #3
Region A:
Residues: [413-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPHGLSRELV MAGWQHCSKL EIMFEKEEQR SDELEKSLEL ADSWKRQGDE LLYSMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1oveA
Description: The structure of p38 alpha in complex with a dihydroquinolinone
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [469-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRPIAERMRL SEEQVCQSFE EVSVIFLEVM NVYDEGLNSI QGAMQTVNTL NKVFSALDEE  60
   61 IISPFVYKVE TVGMVYMAVS GAPDVNPLHA EHACDLALRV MKKFKAHDMG DVAIRVGINS 120
  121 GPVVAGVVGQ KVPRYCLFGD TVNTASRMES SSDPWKIQLS KYTGDKVRQV GYKVESRGTV 180
  181 QVKGKGDMET YWLLEGPEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

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