| Protein: | Pak3-PA, FBpp0293540 |
| Organism: | Drosophila melanogaster |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pak3-PA, FBpp0293540.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..1] | [569..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MSFTKWFKKK GGDGGSISEI GAPTNFQRHF HVSRNQETGD LEGLPAPWVR LMNSQITRDE 60
61 QDKNPDAAYH AVKYYNYSIK KKENEV
|
| Detection Method: |  |
| Confidence: | 19.30103 |
| Match: | 1f3mA |
| Description: | pak1 autoregulatory domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [87-267] |
1 11 21 31 41 51
| | | | | |
1 FKPFITEDVI HEESKEIENY VNYKNKHKSQ DPEKSDDDGS STATETESSS GCGSSAGNSN 60
61 SSSINDSSQQ STVPLDALEE VFKELKTNLE HRETLKAAPQ EPPPVPPKKS PHTIPPKPQI 120
121 KPKPRVTQKF SRTSDIRRDE DSDNQHKINT DTIIIKPAVG AQDAGADDNP DETILRRSKE 180
181 K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-569] |
1 11 21 31 41 51
| | | | | |
1 RAQKTDAEIY VELRAICNSD DPRERYKTTQ EVGKGASGIV FIAADLQNES QVAVKTIDMK 60
61 NQSSKDLILT EIRVLKDFNH KNLVNFLDAY LLEPEDQLWV VMEYMDGGPL TDVVTETVMK 120
121 ERQIACVCRE TLYAISFLHA KGIIHRDIKS DNVLLGMDGS VKVTDFGFCA NIEGDEKRQT 180
181 MVGTPYWMAP EVVTRKKYGK KVDIWSIGIM AIEMIEGQPP YLYETPLRAL YLIAANGRPD 240
241 IKSWDKLSPN LQDFLDRCLQ VEVDRRATAD ELLSHPFLND CSEVKALVPN IKAAKKVLRR 300
301 NV
|
| Detection Method: | |
| Confidence: | 82.69897 |
| Match: | 1f3mC |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
