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View Structure Prediction Details

Protein: CG17565-PA
Organism: Drosophila melanogaster
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG17565-PA.

Description E-value Query
Range
Subject
Range
gi|110645712 - gi|110645712|gb|AAI18705.1| Farnesyltransferase, CAAX box, beta [Xenopus tropicalis]
354.0 [0..1] [400..1]

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Predicted Domain #1
Region A:
Residues: [1-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEEELMFR NFQRLKSYIF DDEKVSTTTS REQQKTESSV EKCFDRFEQI MFTDPRLTQI  60
   61 FRLEHQYYLD AMLRRLPSNY ECLDSSRAWC VYWILQAAQL LSFNFDDQTL NHVVQFLSNC 120
  121 RSPTGGFGGG PGQYAHLAPT YAAVNSLCII GSEQAYRAID RPTLVQFLFS VRDSDGSFRL 180
  181 HVDGETDVRG AYCAISCAKL LNLPEPVIKE LFAGTGDWIA QCQTYEGGFG GAPGLEAHGG 240
  241 YTFCGIAGLA LLNEADKCDR QALLKWTLRR QMTYEGGFQG RTNKLVDGCY SFWVGATIPI 300
  301 TQATLSGVDK QMEHTLFDVE ALQEYILLCC QKQSGGLIDK PGKPQDLYHT CYTLSGVSIA 360
  361 QHSECASSPQ VLGDTINELL PTHPLFNIPP KSVAAARSHF SNSNDTEFLG KDSPSKEES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.154902
Match: 1d8dB
Description: Protein farnesyltransferase, beta-subunit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein prenyltransferase activity 13.7736019666673 bayes_pls_golite062009
protein geranylgeranyltransferase activity 12.9757276506747 bayes_pls_golite062009
Rab geranylgeranyltransferase activity 12.8088011327065 bayes_pls_golite062009
prenyltransferase activity 11.6786310564018 bayes_pls_golite062009
CAAX-protein geranylgeranyltransferase activity 10.5569796788906 bayes_pls_golite062009
protein farnesyltransferase activity 10.5544498824038 bayes_pls_golite062009
binding 1.68564752993879 bayes_pls_golite062009
protein binding 1.45455287827127 bayes_pls_golite062009
transferase activity 1.0950430724883 bayes_pls_golite062009
enzyme regulator activity 0.854896924803117 bayes_pls_golite062009
catalytic activity 0.497699107100544 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle