YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Manf-PA
Organism: Drosophila melanogaster
Length: 173 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Manf-PA.

Description E-value Query
Range
Subject
Range
gi|114587110 - gi|114587110|ref|XP_001169644.1| PREDICTED: similar to arginine-rich protein [Pan troglodytes]
279.0 [0..8] [169..74]
gi|284164, gi|178991 - gi|284164|pir||S27956 arginine-rich protein - human, gi|178991|gb|AAB08753.1| arginine-rich protein ...
278.0 [0..8] [169..62]
gi|30585119 - gi|30585119|gb|AAP36832.1| Homo sapiens arginine-rich, mutated in early stage tumors [synthetic cons...
267.0 [0..8] [169..10]
MANF_BOVIN - Mesencephalic astrocyte-derived neurotrophic factor OS=Bos taurus GN=MANF PE=1 SV=2
265.0 [0..8] [169..7]
gi|110625813, gi... - gi|74227026|dbj|BAE38314.1| unnamed protein product [Mus musculus], gi|74204855|dbj|BAE20927.1| unna...
MANF_RAT - Mesencephalic astrocyte-derived neurotrophic factor OS=Rattus norvegicus GN=Manf PE=1 SV=1
264.0 [0..8] [169..7]
MANF_MOUSE - Mesencephalic astrocyte-derived neurotrophic factor OS=Mus musculus GN=Manf PE=1 SV=1
264.0 [0..8] [169..7]
gi|4894786 - gi|4894786|gb|AAD32615.1|AF132912_1 ARP-like protein [Drosophila melanogaster]
262.0 [0..1] [173..1]

Back

Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTWYMVVVI GFLATLAQTS LALKEEDCEV CVKTVRRFAD SLDDSTKKDY KQIETAFKKF  60
   61 CKAQKNKEHR FCYYLGGLEE SATGILNELS KPLSWSMPAE KICEKLKKKD AQICDLRYEK 120
  121 QIDLNSVDLK KLKVRDLKKI LNDWDESCDG CLEKGDFIKR IEELKPKYSR SEL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.18
Match: 1y02A
Description: Crystal Structure of a FYVE-type domain from caspase regulator CARP2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.561606449522564 bayes_pls_golite062009
receptor binding 0.177430744933542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle