| Protein: | gi|7300134, gi|2... |
| Organism: | Drosophila melanogaster |
| Length: | 925 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7300134, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..448] | [925..328] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MAAAGSNVRC INYYDLCRIC TDSSDHKTNI YSPEGRAKNL SQKILECLSL QVIDEKDRLP 60
61 KVVCAQCVQL VEQIHGLRAT CRNSQTMLNN CLNIRPAPSS DKLYIRDAVD ETGKSLSVAQ 120
121 SAPPVPNGAQ QSGNLLNSII QAVNMQPQQQ YTITMDNGVQ QQQQQHQ
|
| Detection Method: |  |
| Confidence: | 2.59 |
| Match: | 1pzwA |
| Description: | Crystal structure of the zinc finger associated domain of the Drosophila transcription factor Grauzone |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.09202730533215 | bayes_pls_golite062009 |
| protein binding | 0.607672767407822 | bayes_pls_golite062009 |
|
Region A: Residues: [168-249] |
1 11 21 31 41 51
| | | | | |
1 AMPEVQIKSE RQTALEEFIR LKPDIKITPL GKKEPISPAK PQQQHSLQSQ TVTPTINPTQ 60
61 LQLQPQLGDQ LQPLWQQIQQ LQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [250-436] |
1 11 21 31 41 51
| | | | | |
1 LQQQLQQLTN QLQATTQYSV AQDDTSSSGD SKKPKLNFVL SSPTAPQFTT SMPQFGGSQP 60
61 QIQLQLMPGS GGVTSAGTVP AQTQLNAAAL LSSLAGPQST TNLLSPNKCF LPITIRDENS 120
121 DQQIVAHIDT KNLVLPTTYQ VQMKLQPQLA TADGQPIMQL TPTSIPATLQ LTPQTLGNPG 180
181 SAFQGTT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [437-598] |
1 11 21 31 41 51
| | | | | |
1 VTQNQFLAPQ QPLTQLPNTA QVTSQQIIRS PHTSTTNSQL VIRNVTNIPP TPTTPTSSKK 60
61 APTFKTPSPK QKPMPSPKSK TTVGPSSGGS NGTSTNEFKR LITQTKPQPQ VKQQQTAGLS 120
121 ASGAPTATSA NQAAMQRLSS NTTITKVPKQ PASLPAPAPT SN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [599-662] |
1 11 21 31 41 51
| | | | | |
1 PAKLPMLNKQ NITISRISMQ TAPKAQSKPS TTSPTPASQP IPVSVPALSQ AQPPPLAAQH 60
61 KKIV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [663-850] |
1 11 21 31 41 51
| | | | | |
1 RKPPENQDTS GQKVKAARPP QQILPSPQQE GQNATHSGSE APTTSGLICP TCKREFKKKE 60
61 HLTQHVKLHA GLRPFKCSEE GCDKTFSRKE HLSRHLVSHS GQKMYTCEVC KKPFSRKDNL 120
121 NKHRRIHTQT STETLYCCDV CNKNFATKLH YEKHREMHKK IRPESAAPGA TASPAAAPAL 180
181 THVRSNGQ
|
| Detection Method: | |
| Confidence: | 55.154902 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [851-925] |
1 11 21 31 41 51
| | | | | |
1 VPNKAVFEIK QERSAQQTQT QQPPAQVMHV VTTQDLAGNT ITITQAPDSN MPGSLANYVQ 60
61 LGFSQFQNPS ASVAK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
