| Protein: | Atx2-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1084 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Atx2-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..31] | [1010..91] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MNNNSKRKTR PTGGGASGGI SRYNSNDNSL RPTNNKAGAG GGNGGAAVRP SAQGVYNNTF 60
61 FMHSATALVG SVVEVRLRSG NIYEGVFRTF SGNFDIALEL PACIKSKNL
|
| Detection Method: |  |
| Confidence: | 1.16 |
| Match: | 1i4kA |
| Description: | Archaeal homoheptameric Sm protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [110-249] |
1 11 21 31 41 51
| | | | | |
1 PEEGKVPKHI IFPADTVVTI VAKDFDSQYA TAGAFQTDGA ISDKCNGARP DEKELEPWDS 60
61 GANGDIDIEL DSAANGWDPN EMFRKNENTF GVTSTFDDSL ASYTVPLDKG DSLEFKEAEA 120
121 KAEKLAAEIE NNPTCRDRLD
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 2dnrA |
| Description: | No description for 2dnrA was found. |
|
Region A: Residues: [250-1084] |
1 11 21 31 41 51
| | | | | |
1 LENGDEEALF AAVERPSTEQ DQRGDRGDRE RNDRDREREE RDRDRDRDRG NKPRGAGDFQ 60
61 LRETMSSDRY ITKQTRSITG PQLSHVGMSS QGSGRDRDTR GDGSMMMQSG GGSGQGGSTQ 120
121 STAALMLAGG LKGVGPAPSA NASADSSSKY SGGSMVKRKT VPQGGKVMRN NVPTGGSNVS 180
181 VSQGGNGNSV GQNKGGYQPS MGMPSQYSYQ GNSQIMHGSS QYRNQSHMGG ANKLNGDSNA 240
241 NTNKPLPQRQ MRQYQGSQSN SSLNYGGEPQ SLGKPVHGSH GGHPGQNSNS PPLQTAGPQQ 300
301 QQQQQQQQQQ QQQQQQPPQQ QQHQNIQPQG QNTQPARQVR TRDNQMQELR QFGQDFQLAP 360
361 SNTSPPQQQQ QQQQQQQQHQ VQQQQQRALQ QSASPPQQQQ QQQQQQQHVV LHQVPQTHLH 420
421 QAALSQPHYV PQQQPQQAPL PQQQHVPHHM QQKAQQQQLV ETQHQHVQKQ HQSQPQVQQP 480
481 PPQLLQDPSQ QPLPIYHTMP PPQTSPVVVT SPVLLEQPPP QPMPVVQQQQ TQQLATPKPE 540
541 VSPAPPSSNT TTPTGIASTP TAGVIASAGS EKTTPAAPTP TSNSATVPTG TAATAGGATG 600
601 TTPVVKKHVL NPSAKPFTPR GPSTPNPSRP HTPQTPVPMT NIYTTTGGHV PPAANQPIYV 660
661 MQPQHPFPPQ THPQAGQPPR LRRSNYPPMA ASQMHVSASA ATGQPLITAG PIPQFIQYGH 720
721 APHQQQFQSH TYAPMQMRVY PDQPQQLQFM TQTPQSTTPS PGQPHQQFHP PPQPSPAGGG 780
781 PQPAFTPPTQ AATYQLMCVH PQSLLANHYF PPPTPQHPQQ NQQQYQIVMQ QHQPQ
|
| Detection Method: | |
| Confidence: | 7.154902 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
