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View Structure Prediction Details

Protein: Sra-1-PA
Organism: Drosophila melanogaster
Length: 1291 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sra-1-PA.

Description E-value Query
Range
Subject
Range
gi|559703 - gi|559703|dbj|BAA07552.1| KIAA0068 [Homo sapiens]
2261.0 [0..1] [1275..19]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKITLADA LSNVEVLDEL SLPDEQPCIE AQPCSIIYKA NFDTNFEDRN GFVTGIAKYI  60
   61 EEATTHANLN VLLDEGQKHA VMLYTWRCCS RAIPQPKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEQPNRVEIY EKTVEVLAPE VNKLLNFMYF QRKAIEAFSG EVKRLCHAEK RKDFVSEAYL  60
   61 LTLGKFINMF AVLDELKNMK SSVKNDYSTY RRAAQFLKVM SDSHTLQESQ NLSMFLATQN 120
  121 KIRDTVKDTL EKIVGYEDLL SDVVNICVHM FETKMYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPEEKHMLVK VMGFGLFLMD SDACNINKLD QKKKIRLDRI DRIFKNLEVV PLFGDMQIAP  60
   61 FNYIKRSKHF DSSKWPLSSS NA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [338-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISPQADLMVH LPQIREDHVK YISELARYTN EVTTTVKENP SDAENRITAD LALRGLQLLS  60
   61 EWTSVVTELY SWKLLHPTDH HQNKECPVEA EEYERATRYN YTSEEKFALI EVIAMIKGLQ 120
  121 VLMARIETVL CEAIRRNIYS ELQDFVQLSL REPLRKAVKN KKDLIRSIIM SVRETSADWQ 180
  181 KGYEPTDDPV AKGKKDPDGG FRIQVPR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [545-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNVGPSSTQL YMVRTMLESL IADKSGGKRT LRKDIDGNCL LQIDTFHKTS FYWSYLLNFS  60
   61 DTLQKCCDLS QLWYREFYLE MTMGRKVNKC LVRHQHN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [642-810]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EECKDLITME KRIQFPIEMS MPWILTDHIL QTKEPSMMEF VLYPLDLYND SAYYALTVFR  60
   61 KQFLYDEVEA EVNLCFDQFV YKLSEQIFAH YKQLAGSIFL DKRFRLECEV LGFNFQSYPR 120
  121 NNRYETLLKQ RHVQLLGRSI DLNKLITQRI NANMHKSIEL AISRFEGND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [811-911]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITGIVELEGL LEANRICHKL LSKYLALDNF DGMVKEANHN VLAPYGRITL HVFVELNYDF  60
   61 LVNYCYNAAT NRFIRTKVNL SSSQAIQREK PPQMSHYYLW G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [912-990]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKQLNAAYST QYGQYTGFVG SPHFHAMCRL LGYQGIAVVM DIILKDIVKP LIQGSLLQFT  60
   61 KTLMIAMPKS CKLPRCEYG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [991-1036]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPGVLSYYQA HLTDIVQYPD AKTELFQSFR EFGNSIIFCL LIEQAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1037-1136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQEEVCDLLH AALFQNIFPR PFCKENEKPE AKQKRLEAQF ANLQIVSNVE KIGTAKQAMI  60
   61 AREGDLLTRE RLCCGLSIFE VILNRVKSYL DDPVWCGPPP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1137-1291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANGIIHVDEC SEFHRLWSAL QFVYCIPVRG TEYTIEELFG EGLNWAGCVM IVLLGQQRRF  60
   61 EALDFCYHIL RVQRVDGKDE DVKGIQLKRM VDRIRRFQVL NSQIFSILNK YLKGGDGEGS 120
  121 NVEHVRCFPP PQHPSVISSS SHYQDPQKLR QSINN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle