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View Structure Prediction Details

Protein: Mf-PB
Organism: Drosophila melanogaster
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mf-PB.

Description E-value Query
Range
Subject
Range
FBpp0297598, FBp... - type=protein; loc=3R:complement(10997077..10997096,10998322..10998552,10999703..11000065,11001906..1...
560.0 [0..1] [364..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNHLEMIG RNESPSKKAK FWQSYIRSLK GSEDIRAHEA PRASRPYSSY LDSPSYRSIY  60
   61 DEPATANERV QSSGYRYLPV SRDTYGYSPR AIYDHHYSRT IPAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YDAEKAWNDH LKRMQEIERR YPSRYGLYLR DKPLTPNSLV PLEYEPEDKL LAELNKARRS  60
   61 ASPFRPARTT RAGSEPYVPP PSYWNREGSV PRGGPSVFDR ATSLAPFTRP SFRASSLEPL 120
  121 DELFERKLPA IAEADSAPAD APSRPLGIFE RAGSPSPTPV KAGRWGPRPT EVAYDAEGLP 180
  181 IFHPRNRFRD LL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [297-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSPNLPISS IVRDPFWWDV DDLVPFRATS VPRASSPVAR DSYLSPVKNR YLWSKHPARP  60
   61 LTPEEEDLF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle