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View Structure Prediction Details

Protein: Mf-PB
Organism: Drosophila melanogaster
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mf-PB.

Description E-value Query
Range
Subject
Range
FBpp0297598, FBp... - type=protein; loc=3R:complement(10997077..10997096,10998322..10998552,10999703..11000065,11001906..1...
560.0 [0..1] [364..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNHLEMIG RNESPSKKAK FWQSYIRSLK GSEDIRAHEA PRASRPYSSY LDSPSYRSIY  60
   61 DEPATANERV QSSGYRYLPV SRDTYGYSPR AIYDHHYSRT IPAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YDAEKAWNDH LKRMQEIERR YPSRYGLYLR DKPLTPNSLV PLEYEPEDKL LAELNKARRS  60
   61 ASPFRPARTT RAGSEPYVPP PSYWNREGSV PRGGPSVFDR ATSLAPFTRP SFRASSLEPL 120
  121 DELFERKLPA IAEADSAPAD APSRPLGIFE RAGSPSPTPV KAGRWGPRPT EVAYDAEGLP 180
  181 IFHPRNRFRD LL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [297-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSPNLPISS IVRDPFWWDV DDLVPFRATS VPRASSPVAR DSYLSPVKNR YLWSKHPARP  60
   61 LTPEEEDLF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle