Protein: | stumps-PB |
Organism: | Drosophila melanogaster |
Length: | 1012 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stumps-PB.
Description | E-value | Query Range |
Subject Range |
|
1033.0 | [0..1] | [1012..1] |
Region A: Residues: [1-223] |
1 11 21 31 41 51 | | | | | | 1 MLLKVENIEM ETFCCDNCGN VNNTSGSSAS GFLGSPGYNM DDILIITAKH SERAYLRATF 60 61 LKNHFDKITK QRGRKPFNFL HIKIDDGPFS EEIAHKYQNT ALQIVILCPA LLALPHSFLM 120 121 TQLSAIIRVE KVLAILLDVS EEKVKEMHKS ALPSYYKWRR CVVRDNDQVQ ISNILGIATD 180 181 ILGRALCQRP PCQDSSGGGG GGLSRSFSSC TEGFTVLPKK VKL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [224-470] |
1 11 21 31 41 51 | | | | | | 1 GQNKVVALLA EPLEKNDTLK LQVEKSGELI ELRNFKCRNP YTLQFNIPEA CMEISTMIEI 60 61 RIEKNNKSLG ARPIKCESRL RELEQLLRIE DSPIEFMCHA LGIGPVERDA LDQHLLQCFQ 120 121 RNMPPNFHLL SGPSERQPHF FTRLESSPEE YPTLLHFAAR WGLNRLCIQL MECPGGDTAC 180 181 GVRNCAGRTP AELAEQEGHH KLAQNIVSFA EFHELTTMYH YFKGVTPPGE SCPKPSANVV 240 241 IEAHPVK |
Detection Method: | |
Confidence: | 13.522879 |
Match: | 1k1aA |
Description: | bcl-3 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.96927469603571 | bayes_pls_golite062009 |
protein binding | 1.64872738860757 | bayes_pls_golite062009 |
Region A: Residues: [471-648] |
1 11 21 31 41 51 | | | | | | 1 AGKTNKPPKE LPTAEYMEMS SGSERENTPE VRTKTETLAI SNLNYISVET EDENLQASVA 60 61 EKKVESEKKL PEAGNQPGPE KTTNELRINE PPYYQSKEQN QQPKELKNQS KSLDEVDAAP 120 121 LYQTDKFSQE CSQLLENQLG NDYVLQPSNV PVAQDDGNYL FQPSNRPVEE PLRLNRCT |
Detection Method: | |
Confidence: | 9.045757 |
Match: | 1k3zD |
Description: | Transcription factor inhibitor I-kappa-B-beta, IKBB |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [649-884] |
1 11 21 31 41 51 | | | | | | 1 NRQPGYGTLK RSASDASAAS HTRSNADDEL AEIMHDFKNN VLSIRDVEVL VERWKHRNDV 60 61 QQSFREKQDQ IDQLRREYER IQEQVKSHLK RETPFERIKK FFLRSKTPGG NDSLLDETKS 120 121 SIATSCSFKS AGGVSSSAGA GRPISSLSLQ SVSSSSSSSG RLSTGSNCSG ASLGDSGTHS 180 181 DHEDRRFPHC RMMDNYMVPP TPRPVFTPSS TPGDERHQIV FPSPMSSCQR LNTPTS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [885-1012] |
1 11 21 31 41 51 | | | | | | 1 PTGSEHYQMF PSNIPVYGSQ PLVGSQSSNY LNTIMEAKEQ AETQHYQNQN GVTLQPIKLN 60 61 ERSNIIYGKL TKSSSASGCS SFKPKQIPVP CPQVGSIEVQ AEVYQNVGDV APEKDSKAEE 120 121 ETPNYMNC |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.