| Protein: | stumps-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1012 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stumps-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
1033.0 | [0..1] | [1012..1] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MLLKVENIEM ETFCCDNCGN VNNTSGSSAS GFLGSPGYNM DDILIITAKH SERAYLRATF 60
61 LKNHFDKITK QRGRKPFNFL HIKIDDGPFS EEIAHKYQNT ALQIVILCPA LLALPHSFLM 120
121 TQLSAIIRVE KVLAILLDVS EEKVKEMHKS ALPSYYKWRR CVVRDNDQVQ ISNILGIATD 180
181 ILGRALCQRP PCQDSSGGGG GGLSRSFSSC TEGFTVLPKK VKL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [224-470] |
1 11 21 31 41 51
| | | | | |
1 GQNKVVALLA EPLEKNDTLK LQVEKSGELI ELRNFKCRNP YTLQFNIPEA CMEISTMIEI 60
61 RIEKNNKSLG ARPIKCESRL RELEQLLRIE DSPIEFMCHA LGIGPVERDA LDQHLLQCFQ 120
121 RNMPPNFHLL SGPSERQPHF FTRLESSPEE YPTLLHFAAR WGLNRLCIQL MECPGGDTAC 180
181 GVRNCAGRTP AELAEQEGHH KLAQNIVSFA EFHELTTMYH YFKGVTPPGE SCPKPSANVV 240
241 IEAHPVK
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1k1aA |
| Description: | bcl-3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.96927469603571 | bayes_pls_golite062009 |
| protein binding | 1.64872738860757 | bayes_pls_golite062009 |
|
Region A: Residues: [471-648] |
1 11 21 31 41 51
| | | | | |
1 AGKTNKPPKE LPTAEYMEMS SGSERENTPE VRTKTETLAI SNLNYISVET EDENLQASVA 60
61 EKKVESEKKL PEAGNQPGPE KTTNELRINE PPYYQSKEQN QQPKELKNQS KSLDEVDAAP 120
121 LYQTDKFSQE CSQLLENQLG NDYVLQPSNV PVAQDDGNYL FQPSNRPVEE PLRLNRCT
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1k3zD |
| Description: | Transcription factor inhibitor I-kappa-B-beta, IKBB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [649-884] |
1 11 21 31 41 51
| | | | | |
1 NRQPGYGTLK RSASDASAAS HTRSNADDEL AEIMHDFKNN VLSIRDVEVL VERWKHRNDV 60
61 QQSFREKQDQ IDQLRREYER IQEQVKSHLK RETPFERIKK FFLRSKTPGG NDSLLDETKS 120
121 SIATSCSFKS AGGVSSSAGA GRPISSLSLQ SVSSSSSSSG RLSTGSNCSG ASLGDSGTHS 180
181 DHEDRRFPHC RMMDNYMVPP TPRPVFTPSS TPGDERHQIV FPSPMSSCQR LNTPTS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [885-1012] |
1 11 21 31 41 51
| | | | | |
1 PTGSEHYQMF PSNIPVYGSQ PLVGSQSSNY LNTIMEAKEQ AETQHYQNQN GVTLQPIKLN 60
61 ERSNIIYGKL TKSSSASGCS SFKPKQIPVP CPQVGSIEVQ AEVYQNVGDV APEKDSKAEE 120
121 ETPNYMNC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
