| Protein: | stumps-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1146 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stumps-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1243.0 | [0..1] | [1146..2] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MALGSPRGSF NSLAGYPQHA IELQTMNMYR QRSANSHSEF RERLNSCNET HSSQCPGGGG 60
61 ASVAGDHDEV FNPLTSPTSS KSHRHHTLPS GGTRRHSLGN WAQHQHQQQH QQNSGAMGLG 120
121 SPDEVPSMMA PRPPLLSPNK FRGSSHRRRD NCGNVNNTSG SSAS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-314] |
1 11 21 31 41 51
| | | | | |
1 GFLGSPGYNM DDILIITAKH SERAYLRATF LKNHFDKITK QRGRKPFNFL HIKIDDGPFS 60
61 EEIAHKYQNT ALQIVILCPA LLALPHSFLM TQLSAIIRVE KVLAILLDVS EEKVKEMHKS 120
121 ALPSYYKWRR CVVRDNDQVQ ISNILGIATD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [315-692] |
1 11 21 31 41 51
| | | | | |
1 ILGRALCQRP PCQDSSGGGG GGLSRSFSSC TEGFTVLPKK VKLGQNKVVA LLAEPLEKND 60
61 TLKLQVEKSG ELIELRNFKC RNPYTLQFNI PEACMEISTM IEIRIEKNNK SLGARPIKCE 120
121 SRLRELEQLL RIEDSPIEFM CHALGIGPVE RDALDQHLLQ CFQRNMPPNF HLLSGPSERQ 180
181 PHFFTRLESS PEEYPTLLHF AARWGLNRLC IQLMECPGGD TACGVRNCAG RTPAELAEQE 240
241 GHHKLAQNIV SFAEFHELTT MYHYFKGVTP PGESCPKPSA NVVIEAHPVK AGKTNKPPKE 300
301 LPTAEYMEMS SGSERENTPE VRTKTETLAI SNLNYISVET EDENLQASVA EKKVESEKKL 360
361 PEAGNQPGPE KTTNELRI
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.96927469603571 | bayes_pls_golite062009 |
| protein binding | 1.64872738860757 | bayes_pls_golite062009 |
|
Region A: Residues: [693-946] |
1 11 21 31 41 51
| | | | | |
1 NEPPYYQSKE QNQQPKELKN QSKSLDEVDA APLYQTDKFS QECSQLLENQ LGNDYVLQPS 60
61 NVPVAQDDGN YLFQPSNRPV EEPLRLNRCT NRQPGYGTLK RSASDASAAS HTRSNADDEL 120
121 AEIMHDFKNN VLSIRDVEVL VERWKHRNDV QQSFREKQDQ IDQLRREYER IQEQVKSHLK 180
181 RETPFERIKK FFLRSKTPGG NDSLLDETKS SIATSCSFKS AGGVSSSAGA GRPISSLSLQ 240
241 SVSSSSSSSG RLST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [947-1146] |
1 11 21 31 41 51
| | | | | |
1 GSNCSGASLG DSGTHSDHED RRFPHCRMMD NYMVPPTPRP VFTPSSTPGD ERHQIVFPSP 60
61 MSSCQRLNTP TSPTGSEHYQ MFPSNIPVYG SQPLVGSQSS NYLNTIMEAK EQAETQHYQN 120
121 QNGVTLQPIK LNERSNIIYG KLTKSSSASG CSSFKPKQIP VPCPQVGSIE VQAEVYQNVG 180
181 DVAPEKDSKA EEETPNYMNC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
