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View Structure Prediction Details

Protein: CG3259-PA
Organism: Drosophila melanogaster
Length: 588 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3259-PA.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
260.0 [0..2] [587..700]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKDLDAII LETQKVLGKY IKKPPLTEKL LKKPPFRFLM DVFSNFIKQS GTFDGLYTPE  60
   61 EQMFENITSR EDKIRFLQKM IDATKLTTKL DLKVRTSKIV AGQEPELTNE LLQAMASVAE 120
  121 KNLEWDSIVD QVVISHSKTP LTLTKPPKET KNSSKNPSPA GKDEDAKRRK EKRISPQEQK 180
  181 LRKVKEQVSR STPP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2eqoA
Description: No description for 2eqoA was found.

Predicted Domain #2
Region A:
Residues: [195-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEKDKASQKK SKAPKDETKL SRQNSKQKSP SPVKQKSKAK LQPSTESDNL SQSMSPVEEG  60
   61 STKPAASESA PSKPEPEMVP PLKEKEAVVR PVQETPTAPP AEPESRKSSS RSRRSSGSHR 120
  121 QP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPNPIPNESQ SQPAVQSSET SSPPETNSGE AKREVPLTRE NSKEVNQRPR TSLRPPSARP  60
   61 ASARPGAPRR RNVEIVLQPN DQIKMSGINV KLETFGDLDD 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [417-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGENLVIIED SAAHDIVEGG GDEPALEGQL DAQGRLVQQI LETQKELVNQ GAEVEPPPAQ  60
   61 AGRQTSARQV NDVRDVVQKL TKSIGPLGKL LDCIPEDFDA MQLELTMWRD TYTQASTELK 120
  121 REQTLTASAT EPLQHQLQQI QASIAEYREL IDESRHKILQ NNARILKLMM EQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle