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View Structure Prediction Details

Protein: Men-PA
Organism: Drosophila melanogaster
Length: 759 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Men-PA.

Description E-value Query
Range
Subject
Range
gi|7248648 - gi|7248648|gb|AAF43602.1|AF187999_1 malic enzyme [Drosophila melanogaster]
1127.0 [0..1] [759..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSILRRCSG IRKTFGPTPV YPTANNSQSP SSYSRGKERE LGCYTKRNSN SNNNNSHERE  60
   61 SQSCCSSRVC KNHTTTTTTT LEYELSNFAK LTTRITTQSA AEVDTSPHTD TETHRDRDSN 120
  121 PGNIALATDL ELPKGLPLSL SSRHHWNQLQ SSLHALHHQQ QQQQQQLRSY SSTSETNLED 180
  181 KMSKPDSKLD KYAQRDRLGL WGT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-759]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDNEVVGSLS GFTRLLDKRY SKGLAFTHEE RQQLGIHGML PYVVREPSEQ VEHCRALLAR  60
   61 LDQDLDKYMY LISLSERNER LFYNVLSSDI AYMMPLVYTP TVGLACQRYS LIHQNAKGMF 120
  121 ISIKDKGHIY DVLKNWPETD VRAIVVTDGE RILGLGDLGA NGMGIPVGKL SLYTALAGIK 180
  181 PSQCLPITLD VGTNTESILE DPLYIGLRER RATGDLYDEF IDEFMHACVR RFGQNCLIQF 240
  241 EDFANANAFR LLSKYRDSFC TFNDDIQGTA SVAVAGLLAS LKIKKTQLKD NTLLFLGAGE 300
  301 AALGIANLCL MAMKVEGLTE EEAKARIWMV DSRGVITRDR PKGGLTEHKL HFAQLHEPID 360
  361 TLAEAVRKVR PNVLIGAAAQ GGAFNQEILE LMADINETPI IFALSNPTSK AECTAEEAYT 420
  421 YTKGRCIFAS GSPFAPVTYN NKKFYPGQGN NSYIFPGVAL GVLCAGMLNI PEQVFLVAAE 480
  481 RLAELVSKDD LAKGSLYPPL SSIVSCSMAI AERIVEYAYK NGLATVRPEP VNKLAFIKAQ 540
  541 MYDLDYPRSV PATYKM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2aw5A
Description: Crystal structure of a human malic enzyme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle