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View Structure Prediction Details

Protein: Vha55-PC, Vha55-...
Organism: Drosophila melanogaster
Length: 490 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vha55-PC, Vha55-....

Description E-value Query
Range
Subject
Range
ATPB_AGAAF - ATP synthase subunit beta, chloroplastic OS=Agapanthus africanus GN=atpB PE=3 SV=1
572.0 [0..8] [489..2]

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Predicted Domain #1
Region A:
Residues: [1-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAQQAQREH VLAVSRDFIS QPRLTYKTVS GVNGPLVILD EVKFPKFAEI VQLRLADGTV  60
   61 RSGQVLEVSG SKAVVQVFEG TSGIDAKNTL CEFTGDILRT PVSEDMLGRV FNGSGKPIDK 120
  121 GPPILAEDFL DIQGQPINPW SRIYPEEMIQ TGISAIDVMN SIARGQKIPI FSAAGLPHNE 180
  181 IAAQICRQAG LVKLPGKSVL DDHTDNFAIV FAAMGVNMET ARFFKQDFEE NGSMENVCLF 240
  241 LNLANDPTIE RIITPRLALT AAEFLAYQCE KHVLVILTDM SSYAEALREV SAAREEVPGR 300
  301 RGFPGYMYTD LATIYERAGR VEGRNGSITQ IPILTMPNDD ITHPIPDLTG YITEGQIYVD 360
  361 RQLHNRQIYP PVNVLPSLSR LMKSAIGEGM TRKDHSDVSN QLYACYAIGK DVQAMKAVVG 420
  421 EEALTPDDLL YLEFLTKFEK NFISQGNYEN RTVFESLDIG WQLLRIFPKE MLKRIPASIL 480
  481 AEFYPRDSRH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 2c61A
Description: No description for 2c61A was found.

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