YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG4830-PA
Organism: Drosophila melanogaster
Length: 534 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4830-PA.

Description E-value Query
Range
Subject
Range
gi|77996178, gi|... - gi|78044063|ref|YP_360551.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus hydrogenoformans Z-...
541.0 [0..9] [534..9]

Back

Predicted Domain #1
Region A:
Residues: [1-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLPCSYDA ENKIWKGIPQ NNPFKPETSL GRIIFKNMRN WPKNVCQISD SEGVEVTFGQ  60
   61 ALTWAIRIAQ QLKSRGLDHK DIIGISARNT TYIMPTAVAC FFHGTPFQSA NPILEESTLK 120
  121 HLYNISKPKI IFTDADHYDK LYSATSAFKP EIILTTGTKD GVLSIQDLLA PTKTEFFYQP 180
  181 TPLKEGPSQT VAILTSSGTT GMPKAVCISN DILTQETVFV NGYDTIFISA SLDWITGLWA 240
  241 TIFSTVNGCT RIISSKPFAA DYFVYLVSKY SITYALIPPE HCCSLLDCPT ATPEKLGSLT 300
  301 KLNFGGGRMT QATVERVKKL APNGVLNSSY GMTEVGFIVF NHGHLKLTAA GNPLPGIQVK 360
  361 IVDDDGNQLG VNQTGEIIVH NGFSWNGYFA DPEATKAMQD EEGWFHTGDM GYFDEDDYLY 420
  421 MTDRKKEVLK WKGLQMWPAE VEAVIDELPE VKRVCVIGVY DETQGDVPGA LVVREDNATL 480
  481 TAQQVIDHVA KRLPDIQKQL RAGVQFADEI PQNHNGKVVR RYARDLFVAL SKKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 1ba3A
Description: FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-sulfur bonds 5.10123876514454 bayes_pls_golite062009
fatty acid ligase activity 4.83067429373059 bayes_pls_golite062009
long-chain fatty acid-CoA ligase activity 4.72692389032116 bayes_pls_golite062009
acid-thiol ligase activity 4.28278725989432 bayes_pls_golite062009
CoA-ligase activity 4.12850865352867 bayes_pls_golite062009
acetate-CoA ligase activity 3.83959707137518 bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) 2.74744781333102 bayes_pls_golite062009
Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity 2.74744781333102 bayes_pls_golite062009
luciferin monooxygenase activity 2.67396462766343 bayes_pls_golite062009
ligase activity 2.49556073715112 bayes_pls_golite062009
catalytic activity 1.83545185797733 bayes_pls_golite062009
binding 0.548022061473268 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.464663038956639 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle