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View Structure Prediction Details

Protein: CG4810-PA
Organism: Drosophila melanogaster
Length: 551 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4810-PA.

Description E-value Query
Range
Subject
Range
gi|91088805 - gi|91088805|ref|XP_969059.1| PREDICTED: similar to AGAP002337-PA [Tribolium castaneum]
876.0 [0..3] [546..9]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYAPFIKP YVEYNEHGWG PCEVPELDVP YQPFCKSDRL GKICDWTAMV PEKKFPSKYA  60
   61 STFGNNSQYA YFYEDDDSTF HLVDTTGSKA TK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYQRGRYRPN MRNNVRSRGR TGRGTPNIAS LGGSTAGGAT ASTTKYGKGR NTRNTQNMGR  60
   61 R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [154-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGRNAPTRIR ESSVMVQSDW VSIEEIDFPR LLKLALPNIK DGKDIATCGW LEFYDKLYDR  60
   61 VNLRNEKPLQ KMDRVVHTVT TTDDPVIRRL SRTMGNVFAT DEILSTIMCC TRSNYSWDVV 120
  121 VEKLGTKVFL DKRYNDQFDL LTVNETSVEP PMDEEGSINS AHSLAMEATL INHNFSQQVL 180
  181 RIGDQEPRFM FEEPNPFEEP GVDLASIGYR YRQWDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [370-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNDVVLIARC KHNGVIQGPN GDVQFLSIKA LNEWDSKVTN SVEWRQKLDT QRGAVLASEL  60
   61 RNNACKLARW TVEAVLAGSD QLKLGYVSRM 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [460-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPRDHLRHVI LGTQQFKPQE FATQINLNMD NAWGVLRCLI DLVMRQPDGK YLIMKDPNKP  60
   61 MIRLYDVPEN AFDSDGDEEE ESSDPLSNSN DN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle