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View Structure Prediction Details

Protein: CG4810-PA
Organism: Drosophila melanogaster
Length: 551 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4810-PA.

Description E-value Query
Range
Subject
Range
gi|91088805 - gi|91088805|ref|XP_969059.1| PREDICTED: similar to AGAP002337-PA [Tribolium castaneum]
876.0 [0..3] [546..9]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYAPFIKP YVEYNEHGWG PCEVPELDVP YQPFCKSDRL GKICDWTAMV PEKKFPSKYA  60
   61 STFGNNSQYA YFYEDDDSTF HLVDTTGSKA TK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYQRGRYRPN MRNNVRSRGR TGRGTPNIAS LGGSTAGGAT ASTTKYGKGR NTRNTQNMGR  60
   61 R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [154-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGRNAPTRIR ESSVMVQSDW VSIEEIDFPR LLKLALPNIK DGKDIATCGW LEFYDKLYDR  60
   61 VNLRNEKPLQ KMDRVVHTVT TTDDPVIRRL SRTMGNVFAT DEILSTIMCC TRSNYSWDVV 120
  121 VEKLGTKVFL DKRYNDQFDL LTVNETSVEP PMDEEGSINS AHSLAMEATL INHNFSQQVL 180
  181 RIGDQEPRFM FEEPNPFEEP GVDLASIGYR YRQWDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [370-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNDVVLIARC KHNGVIQGPN GDVQFLSIKA LNEWDSKVTN SVEWRQKLDT QRGAVLASEL  60
   61 RNNACKLARW TVEAVLAGSD QLKLGYVSRM 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [460-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPRDHLRHVI LGTQQFKPQE FATQINLNMD NAWGVLRCLI DLVMRQPDGK YLIMKDPNKP  60
   61 MIRLYDVPEN AFDSDGDEEE ESSDPLSNSN DN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle