| Protein: | Lk6-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1142 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lk6-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
551.0 | [0..1] | [1133..1] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MVEPKSGTAA SAAAAKASNN NNNNHPRGSG DSGIRSGSGI SCSNTDNSCS QSQSDGQNEL 60
61 TRYSSEDVSG NESSEAPNMT EVERQAELNR HKEEMQKKRR KK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [103-457] |
1 11 21 31 41 51
| | | | | |
1 RISSSLHSST FQELYKLTGE ILGEGAYASV QTCVNIYTDL EYAVKVIDKI PGHARARVFR 60
61 EVETFHHCQG HLGILQLIEF FEDDEKFYLV FEKINGGPLL SRIQEHICFS EHEASQIIKE 120
121 IASGLDFLHK KGIAHRDLKP ENILCVKTDS LCPIKICDFD LGSGIKFTTD ISSPAATPQL 180
181 LTPVGSAEFM APEVVDLFVG EAHYYDKRCD LWSLGVIAYI LLCGYPPFSG NCGEDCGWNR 240
241 GENCRTCQEL LFESIQEGHF SFPEAEWHDV SDEAKDLISN LLVKKASNRL SAEAVLNHPW 300
301 IRMCEQEPPA SKHGRRHKAL QTPSNIRRNH QSAREISQFA ESAMAVKRVV LQHFS
|
| Detection Method: | |
| Confidence: | 68.09691 |
| Match: | 2hw6A |
| Description: | No description for 2hw6A was found. |
|
Region A: Residues: [458-633] |
1 11 21 31 41 51
| | | | | |
1 MRYDYMKERP NIYQPSQAYM DAYSDENYNP KPPGHYTRNR SQRNPASSLC GYGGRMSSMH 60
61 GQRANSRRSS RNASRNASAI YPNSGGFKTL NVHEEDDDDE GLEAFGHIDD DDEWSRSRRE 120
121 YQQQCETLGE DRFRRQSGSE GDEVEDDEDG ENEDYQHYKH YWRELDEEEG DDYLYE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [634-1002] |
1 11 21 31 41 51
| | | | | |
1 QQQRVDDKFG EEEFEDEPKE ETQADNLKLS KAYVEQVGET NVEKSKPQDD NGGYIREDLI 60
61 MDNMDMKKNT QQSEFAKLTI MRNDAQTEEN KIMQQQDEEK KEEKQQDDVD GAKKQGPSSD 120
121 ISATTITDNN KLQTPVMTTT HINNWQTGDA IEDDDVKLLD SISDLNEKLP EIYETANIVV 180
181 NSAAVPAAST PAASATRPPT DNPEEDDSNV TKPTTTAEGT TMQTTFGMSA EEEKPVALSH 240
241 TAGHHSKTGR TVNFAPDAYQ NDEDADIDED DDYDDEENLH EHSKQQLPSN AYTRKQRQQH 300
301 QRYIVPRYQL ADQVPQRQHT ENWRYRTHHS QEQQPTADYR KYRPPFSTGG GGGHHGNQQR 360
361 NYLGSFSHS
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1003-1142] |
1 11 21 31 41 51
| | | | | |
1 GGAAGYKIAP MPPPMQPPPR HNSAGSSGSG SGSGGSPPSD EQSAIRNWRQ DCVYARSCGM 60
61 NQGPEQQRHN RSSGQRVQQQ PRIGSGRFAH LQAAQLMDEL PDMRIGLSPP SESVLLQRRL 120
121 RQQQRANDLS EYCEPATASG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
