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View Structure Prediction Details

Protein: gi|24645749, gi|...
Organism: Drosophila melanogaster
Length: 788 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645749, gi|....

Description E-value Query
Range
Subject
Range
gi|10726443, gi|... - gi|24645747|ref|NP_731502.1| chromosome associated protein H2, isoform A [Drosophila melanogaster], ...
1263.0 [0..1] [788..179]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDKRFNAA GFVKCTRNRT IEYLYQDHTP PNLWKHAPIV DPHNPYDQDE KKQYKMFTYH  60
   61 VEHRYNTLLP DIPFERLNLI KEYVHTNQVN TTEILNEHMT TKEYLDEYIA LENQMLAARY 120
  121 GAIVTRRRRL VDSARFMEDN LDEGLAKKMC MDKNL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMDTNETVLI DQSLVDENSR SLTTAESTMG ISQAENSTLK SSEVEATLSV SHIENSLSDS  60
   61 QEENPPLSST LAINESSVLD STRVDPIKDL TLDELLLIDS GISMEELSDI QMHTDLEDQR 120
  121 QLSPMLQMVS PSMEAKTLNI IEMDADLIMN VPREVSYPIL LNVMGLPIKR LRRKCIFKLP 180
  181 PEFDLFRQAR LPIKREGQQK S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [357-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTTPRTVLQI GREAPQNERE PGSPCSLEFD EDLSKLLCHT MSRRETILHI LPDFLGFRQR  60
   61 RPTFDSGFDI EEPRVSSCVS TIGEVKTELE DEIEANTNNL TDASASDALN ENVNDTKESG 120
  121 LGDSLAQELN ASTEPNAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [495-705]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNTANSSQLE VTATESSGTL SGLETTVDLG MESALVSSVL DLSTEPSAMD SNIINVTQPD  60
   61 NSDLEISTVQ DQDTLHDEAD ANDLSAETPN PIADSAVDDC SLIRDWHRRL APALEAAHER 120
  121 QNFNIKDLGT EILDICKAGN RTATLADVMA DKDPSIMCRY MLASLVLTNH GNVSLDFENR 180
  181 DKSKPIDMSQ FRMHLKSMKR MEINPEDDVG N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [706-788]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INAAQSKSTP RSKQLNDSAH KPRTSTTASA PTKRKSAENS LSEVFAKTVR LIQPIPKMWP  60
   61 TPSDADSGIS SMGSSLASTA RLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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