| Protein: | nmdyn-D7-PA |
| Organism: | Drosophila melanogaster |
| Length: | 387 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nmdyn-D7-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
418.0 | [0..1] | [387..13] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MKPAAIPASE RRLAFVAEWF HAEAGIIRTF LITYYVSDKA VEVFDQRNKR TFLRRTKIPE 60
61 LTQRDFFVGS KINVFGRQFD IVDYADDTTR TNLAKY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-245] |
1 11 21 31 41 51
| | | | | |
1 RKKGFVLLKN NMWTKHLGKF LKTLIDNKIN INQGMMVQFS PKMVTQFLSG KDTTDVSSSV 60
61 LMNELLAGPA ISLELIGDNV VETIKACAQY KSTEAETPSV KLSPSLEELF ESEEIRYGFY 120
121 YSDNDNDVEM DLKFISEARH SIIKECVFK
|
| Detection Method: | |
| Confidence: | 6.61 |
| Match: | 1wkjA |
| Description: | Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 6.4448415473479 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 5.85502930858634 | bayes_pls_golite062009 |
| nucleoside diphosphate kinase activity | 4.61067707314941 | bayes_pls_golite062009 |
| kinase activity | 4.26784564496601 | bayes_pls_golite062009 |
| catalytic activity | 1.80062327922062 | bayes_pls_golite062009 |
| transferase activity | 0.96744394416511 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.752351123941402 | bayes_pls_golite062009 |
|
Region A: Residues: [246-387] |
1 11 21 31 41 51
| | | | | |
1 NTTLAIIKPH SIKDGLLGDI ISEILSNGFR LTAMRMILMA RINCEEFYEV YRGVVPEYIP 60
61 MVAQLASGVC MCMEIACADP EKKTDREFRN FCGPMDPEIA KLLRPHTLRA KFGKSKVQNA 120
121 VHCTDLPDDS NLELQYMFKI ID
|
| Detection Method: | |
| Confidence: | 56.522879 |
| Match: | 1jxvA |
| Description: | Nucleoside diphosphate kinases |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 7.03061421339491 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 6.44414487354776 | bayes_pls_golite062009 |
| nucleoside diphosphate kinase activity | 5.37425936177415 | bayes_pls_golite062009 |
| kinase activity | 4.60914087199794 | bayes_pls_golite062009 |
| catalytic activity | 1.91319552351397 | bayes_pls_golite062009 |
| transferase activity | 1.21163341858368 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.06719669551075 | bayes_pls_golite062009 |
