| Protein: | Vps45-PA |
| Organism: | Drosophila melanogaster |
| Length: | 574 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vps45-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
545.0 | [0..1] | [574..1] |
|
Region A: Residues: [1-574] |
1 11 21 31 41 51
| | | | | |
1 MNLISGIKLY IEKMCSESGP GMKIILLDKE TTSIISMAFS QSDMLQREVY LFERLDSGRS 60
61 NERLKYLKCI VFIRPTKQNI QLLANELRNP KYSAYYIYFS NIIPRTDIKY LAECDESESV 120
121 REVKELYADY LCVNPNLFSL GIPNCMANLN WLPDALNRSM QGITAVLLSL KLNPVIRYRA 180
181 GSQAAQLLAK LIYEQITKES SLFDFRSNMD GAAPPLLLVL DRRDDPVTPL LHQWTYQAMV 240
241 HELLHIKNNR LDLSNCPNVP KDFKELVLSG DQDDFYGNNM YANYGEIGST IKQLMEEFQR 300
301 KANDHKKVES IADMKNFIES YPQFKKMSGT VQKHLCVIGE LSALSNKRNL FEVSELEQEI 360
361 ACKAEHSAQL QRIKKLIADE RVSIDDALKL VALYALRYER HANCDTSGLL QIIKTRGGRA 420
421 AIVPSLIEYA GTHVRQGDLF NMVRITDAVK LTRNLIKGLK GVENVFTQHT PLLKETLEDV 480
481 FKGRELDPLF PAINSELVPF RRPPQEVVVF IIGGATYEEA LAVHQLNNAG YKVILGGTTI 540
541 HNSQSFIQEV VAATSGIQFK HTKSMIKYCS TDNI
|
| Detection Method: |  |
| Confidence: | 137.0 |
| Match: | 1epuA |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 4.56428593085019 | bayes_pls_golite062009 |
| syntaxin binding | 3.46044132736061 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| protein binding | 1.7224010512877 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.269372794919901 | bayes_pls_golite062009 |
