| Protein: | by-PC, by-PA, by-PD |
| Organism: | Drosophila melanogaster |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for by-PC, by-PA, by-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
338.0 | [0..457] | [716..3] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MRTPYEESAA AADHKYQYQY TAANNNNNYY KNYNVNGNGQ ANGNGNLSGI GNGNGIGNGN 60
61 GYGIPYHARE NSLPFSYGIA KTSTPLRKTP TPTRVDSFLD FDFGPTNT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-194] |
1 11 21 31 41 51
| | | | | |
1 NVNSNSSSNN GGTGDMIKPP TRLTSPLLVR KTLGNAVSPT SSTNTNTIAN TYHYTSSSAT 60
61 PTPVRDNFEQ LLRERREKVY NEYRNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [195-306] |
1 11 21 31 41 51
| | | | | |
1 DRESSGERAR VAPAPPQRQY YPSDGYGIGL KNDSNGTLYR KSPSSNGKST KYNYDFEFNL 60
61 NLDDVRPEPT PYTTRNIHFE DLRLDQDVPD GVVNRRTMER NYHTINSLET TH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [307-373] |
1 11 21 31 41 51
| | | | | |
1 KRQQLEPLEQ LGAVYGQNHM EETLTRTRRD LSASTSTSKS TSPLPAIGVP AIAPASPIYA 60
61 TSTKRVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [374-446] |
1 11 21 31 41 51
| | | | | |
1 NPNTNGQQQM TPSPTSRPET PAFPVTPRTP FGASSSSSAS LAPTTQLPPE SIYQTGPRRG 60
61 VPPALQPLEV SAD
|
| Detection Method: | |
| Confidence: | 35.221849 |
| Match: | 1g83A |
| Description: | Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [447-664] |
1 11 21 31 41 51
| | | | | |
1 SVQFARSSSQ FWYKPNLTRE DAIALLASAQ PGTFLVRDST TYKDSYGLVV RVSQPPPGSQ 60
61 ELVRHFLIEP TKGGVHLKGC DDEPVFTSLS ALVFEHSISQ LALPCLLRLP DRDIVPPVRA 120
121 TTPAQQHLLA HGAATNVLWL YSCDTESLTG NEAIRKAIRQ MYGQQPLPQP TEVHFKVSSQ 180
181 GITLTDNTRK KFFRKHYKAD VISHCAIDPE NRMWTSEG
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1m61A |
| Description: | Tyrosine-protein kinase zap-70 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.28887512041698 | bayes_pls_golite062009 |
| signal transducer activity | 2.07133863841547 | bayes_pls_golite062009 |
| molecular transducer activity | 2.07133863841547 | bayes_pls_golite062009 |
| protein binding | 2.04603930248857 | bayes_pls_golite062009 |
| molecular adaptor activity | 0.93584922485564 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 0.72842829338771 | bayes_pls_golite062009 |
| receptor binding | 0.49361386378291 | bayes_pls_golite062009 |
| protein binding, bridging | 0.192710997278041 | bayes_pls_golite062009 |
|
Region A: Residues: [665-720] |
1 11 21 31 41 51
| | | | | |
1 ESDKKTIFAF VARRSHSSTD NQCHVFCDLS VSQPAAAIVS FANRTLPTEK LRNYVL
|
| Detection Method: | |
| Confidence: | 59.045757 |
| Match: | 2gjyA |
| Description: | No description for 2gjyA was found. |
