| Protein: | rump-PA |
| Organism: | Drosophila melanogaster |
| Length: | 632 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rump-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..1] | [502..57] |
|
Region A: Residues: [1-217] |
1 11 21 31 41 51
| | | | | |
1 MSMDASNSVE SREKERDRRG RGARGSRFTD ADGNGNGAGS QGGGVAARDR SRERRNCRVY 60
61 ISNIPYDYRW QDLKDLFRRI VGSIEYVQLF FDESGKARGC GIVEFKDPEN VQKALEKMNR 120
121 YEVNGRELVV KEDHGEQRDQ YGRIVRDGGG GGGGGGGVQG GNGGNNGGGG GGGRDHMDDR 180
181 DRGFSRRDDD RLSGRNNFNM MSNDYNNSSN YNLYGLS
|
| Detection Method: |  |
| Confidence: | 3.72 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
|
Region A: Residues: [218-324] |
1 11 21 31 41 51
| | | | | |
1 ASFLESLGIS GPLHNKVFVA NLDYKVDNKK LKQVFKLAGK VQSVDLSLDK EGNSRGFAVI 60
61 EYDHPVEAVQ AISMLDRQML FDRRMTVRLD RIPDKNEGIK LPEGLGG
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2do0A |
| Description: | No description for 2do0A was found. |
|
Region A: Residues: [325-561] |
1 11 21 31 41 51
| | | | | |
1 VGIGLGPNGE PLRDVAHNLP NGGQSQGQLL GNAQQGSQLG SVGSQPNSSA VSNATTNLLN 60
61 NLTGVMFGNH AAVQPSPVAP VQKPSLGNNT GSGGLNLNNL NPSILAAVVG NLGNQGGNLS 120
121 NPLLSSSLSN LGLNLGNSGN DDNLPPSNVG LSNNYSSGGT GGGNSYSSGN NYSGGGGSSN 180
181 LGYNAYSSSG GMGGGNGGVG VDGNDYNTGN PLDVYGGGSN VGNSNVGSAN AVGASRK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [562-632] |
1 11 21 31 41 51
| | | | | |
1 SDTIIIKNVP ITCTWQTLRD KFREIGDVKF AEIRGNDVGV VRFFKERDAE LAIALMDGSR 60
61 LDGRNIKVTY F
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 2ditA |
| Description: | No description for 2ditA was found. |
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
