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View Structure Prediction Details

Protein: CG18005-PA
Organism: Drosophila melanogaster
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG18005-PA.

Description E-value Query
Range
Subject
Range
gi|54639259, gi|... - gi|54639259|gb|EAL28661.1| GA14763 [Drosophila pseudoobscura pseudoobscura], gi|125777160|ref|XP_001...
gi|125777160|ref... - GA14763-PA [Drosophila pseudoobscura], GA14763 [Drosophila pseudoobscura pseudoobscura]
468.0 [0..1] [557..1]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAHLEAPP SVRLTNDDFR KLLATPRAPP PGSGTSSTSA GGSLATATFA TPSTAPGTTG  60
   61 LSGEKKKGQS SSERND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRRKKKNFYA ALKKQEDVKL QELSEKYRDR ARERRDGANP DYVNVSTPGH GSSTNAYRAV  60
   61 APDMKSGIDA QERRRRIIQE SKFLGGDIQH THLVKGLDYA LLQKVRSELH SKEAEEEEIA 120
  121 AAVAREKLAE AAAAAEQLEA ERRESEDINA INGALARNIY NLVQARRSKE VPRNELFAPG 180
  181 RMAYVIDLDD ELGESD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #3
Region A:
Residues: [273-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPTTLKRSKF EVPVSQEDVA TLTTNDIVIN KLSQILSYLR AGGRNKKNKK RDKDKPLFYE  60
   61 KEVENLRGSS SNGGSSRHAT SSSSNMGGKS A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [364-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLGDNIYDDI GDYQPSATRP ERNRQEQGKS APSYFGDGPP EASEEPIISS IPPPPKISKA  60
   61 MAARFAEPEG YAECYPGLEE MNDAIDDSDD EVDYTKMDLG NKKGPIGRWD FDTQEEYSDY 120
  121 MSTKEALPKA AFQYGVKMQD GRKTRKNKTE KNEKAELDRE WQKIQTIIQK RKLPKDGGGG 180
  181 GAGGDEPDYK SAKY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle