| Protein: | Ir84a-PA |
| Organism: | Drosophila melanogaster |
| Length: | 693 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ir84a-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
473.0 | [0..35] | [693..497] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MKTYKNARGP AQSKHKSPKN ESVLKWPYKM IKLQVKVISW PLIILTAFLR VLQIESINTN 60
61 FLELAAFEDF LRSEHLSHVL VVRGDDADGD WKIECHQKLL ANYRVQFYRP EMSANFEDLM 120
121 FYGSPRTAVL VL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [133-252] |
1 11 21 31 41 51
| | | | | |
1 NSEHVLVRRQ VFGVASEAGY FNNSLAWFIL GSGRESLPVE QLIDQLLSGY RMGIDADITV 60
61 ALRGPDNASM LFYDVYRISR QANTPLIIEK KGLWTHSGGY QKFGNFKNTW VIRRRNFLNV 120
121
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2e4zA |
| Description: | No description for 2e4zA was found. |
|
Region A: Residues: [253-514] |
1 11 21 31 41 51
| | | | | |
1 TLIGSTVVGC LPNTSPRSLT TYLQIPQLTE KPPGFGDMEY LADDKQLQQL DPMQRKTYQL 60
61 FQLVERMFNL SLAISLTDKW GELLDNGSWS GVMGQVTSRE ADFAVCPIRF VLDRQPYVQY 120
121 SAVLHTQNIH FLFRHPRRSH IKNIFFEPLS NQVWWCVLAL VTGSTILLLF HVRLERMLSN 180
181 MENRFSFVWF TMLETYLQQG PANEIFRLFS TRLLISLSCI FSFMLMQFYG AFIVGSLLSE 240
241 SARSIVNLQA LYDSNLAIGM EN
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 1pb8A |
| Description: | N-methyl-D-aspartate receptor subunit 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| amine binding | 2.25634377868866 | bayes_pls_golite062009 |
| binding | 1.99193554770277 | bayes_pls_golite062009 |
| receptor activity | 1.74349172783363 | bayes_pls_golite062009 |
| signal transducer activity | 1.44487216360172 | bayes_pls_golite062009 |
| molecular transducer activity | 1.44487216360172 | bayes_pls_golite062009 |
| peptide binding | 1.01178416544223 | bayes_pls_golite062009 |
| nucleic acid binding | 0.650797312673016 | bayes_pls_golite062009 |
| transporter activity | 0.592106222356256 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.566902324147088 | bayes_pls_golite062009 |
| transcription factor activity | 0.392543807732656 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.385015934033076 | bayes_pls_golite062009 |
| DNA binding | 0.366854341510606 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0690147885410379 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.0523977889638052 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0130164106420343 | bayes_pls_golite062009 |
|
Region A: Residues: [515-693] |
1 11 21 31 41 51
| | | | | |
1 ISYNFPIFTN TSNQLVRDVY VKKICKSGEH NIMSLQQGAE RIIQGRFAFH TAIDRMYRLL 60
61 LELQMDEAEF CDLQEVMFNL PYDSGSVMPK GSPWREHLAH ALLHFRATGL LQYNDKKWMV 120
121 RRPDCSLFKT SQAEVDLEHF APALFALALA MVASALVFLL ELFLHWLPDF RRRLGTMST
|
| Detection Method: | |
| Confidence: | 28.522879 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
