| Protein: | sec8-PA |
| Organism: | Drosophila melanogaster |
| Length: | 985 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec8-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
698.0 | [0..1] | [985..1] |
|
Region A: Residues: [1-435] |
1 11 21 31 41 51
| | | | | |
1 MDAPPPTKPP RGVKYGKDES AGCGFLVNVI KSLGFSETTE ERQKEKQKIE AEFKRSDLRL 60
61 NELVSRHDQQ LTQVLPLFSQ VSSEVTASRE RIHAVKENLG VCKRLLQCRR DELRKMWMDA 120
121 VQHKYVLEML EQIQELRKVP QRVVGYTAKR QYLHASKALT DALTTLNGPL QAVEGLSDLR 180
181 TDLQTRRQQL YQRLHEELVT QVYTNSANEA LSSFQRTNSS RLNSSFTRGI GARRSTDRIE 240
241 ANARVRKALA EMAQSFDLDK AEVIEDADLI YPELSMSYFV AIIVESFGML HKVPDSLETL 300
301 RVQIQTELLN VVRHTTHQLS VSGATADTNP LLSLLEVIFK QFKAIAKTHS LLLKNYLSVG 360
361 QKYSVVGPQP YDLTDFWAQA QSVLQLLLTD YLDIQNAAAD ESAQTGFSEP TSNINSYFLR 420
421 RKVPSTKRSM FKFDK
|
| Detection Method: |  |
| Confidence: | 18.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [436-487] |
1 11 21 31 41 51
| | | | | |
1 SSHVGTSNNS DAFKEHRRNA SDASVDDNLA GQLGGSGKGS TSGLFPHEKK QR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [488-985] |
1 11 21 31 41 51
| | | | | |
1 EKILICTPDQ SIITKVYLPL MGYIKEIENF MKCKPGQPCS LHDFLDNYIK DTFLTKGHNR 60
61 NLQLTIESLS KNQDAWRTII SPEEIKALNL SRPLLQSTVM VERRLMETKN LIQDLPCYSE 120
121 DLLKMVCALL KAYREICQAA YRGIVQPDSE DKRIYSVAWL KDEDISRFLK TLPNWTDLKT 180
181 YSQKSRHNRK LHRGSFEPSE EESPLQVQQR NIREAEMLTS NLGEGGITQQ EILVEISVLK 240
241 ELAILQESME WFSCRVSEFA NDLRRPLVNG LNAVPAECGA DIAVKDGTIK VMTNLALEFD 300
301 ELANTCLLVL HLEVRVQCFH YLRSKSSVRT NSYVGSKDDI LEPDRQVQVL TKRLSEMDEA 360
361 FSATLHPRKT RYIFEGLAHL ASRILIQASN YLEHIDQITV QRMCRNAIAL QQTLSNITAS 420
421 REVALDQARH FYELLCMEPD EILNALLERG TQFSEMQLLN ALQLSCKSFG ITDANLLASY 480
481 QQKLSDILGA KPSKGVVV
|
| Detection Method: | |
| Confidence: | 0.995 |
| Match: | 2a2fX |
| Description: | Crystal Structure of Sec15 C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
