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View Structure Prediction Details

Protein: CG2926-PA
Organism: Drosophila melanogaster
Length: 2296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2926-PA.

Description E-value Query
Range
Subject
Range
gi|55380423, gi|... - gi|56307416|ref|NP_787974.3| dumpy CG33196-PB [Drosophila melanogaster], gi|55380423|gb|AAN10358.4| ...
364.0 [0..293] [2247..4527]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRDSDAVS DAGPRLSQQR GQRNRRIIMR IEFKDSEDSA SDQDRDDRPS CSAATRLRRS  60
   61 TRRQEVASHS DSDSVPRKST RKLRNRYGPR SDCSSSGSDI DQLPTRTRKR KKVESSDEEE 120
  121 PERTPNAVGR IQPMPADPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGFSSDISSN DLLEKCPICL LTFRQQEIGT PATCEHIFCA ACIDAWSRNV QTCPIDRIEF  60
   61 DRIIVRDSYA SRRVVREVRL D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2ep4A
Description: No description for 2ep4A was found.

Predicted Domain #3
Region A:
Residues: [221-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSKSNTELVV DDEADTAALS EEEVTNCEIC ESPDREDVML LCDSCNQGYH MDCLDPPLYE  60
   61 IPAGSWYCDN CIDSDDEDDN EQLELADDLD QLYEDIRGMG LPETRLRVRE VQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.30103
Match: 2e6rA
Description: No description for 2e6rA was found.

Predicted Domain #4
Region A:
Residues: [334-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPRILRTRQN ERIRAAVLRR TRSGATSAED STLTRTRTRT TTTTTTTTTT TRRTTTSTKK  60
   61 RPVQRRRRRR TRYRTYVVEY DLNNFDEKFA LKTSKKVIRR RRRRRRRGVA TAS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [447-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGPGRRLSA SKRLAEQMGV KSEGFQSSHL SGGTASSFSL FGNANDLEYF SDSEPDAVSQ  60
   61 ISSAGLGSTA VQTSVRIGSI GAPRIRKALL QGKARIAAPP TAPTSAPAAD ILSSILDLQD 120
  121 RWHDASRNLG EVHIRADGTL NI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [589-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQRPAPTATE APLPKAGTSK TEKHLTQAPL YQQGGGGPNY NRGGGAGSSD SYNNRYSGNT  60
   61 SYRGGGGGGA GGSSGGSGVP SSSGEASSRH LTGEGDGQGG GGFGNQNFSS SG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [701-841]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNNNTNMSSF IPFHLRFNTP TRQQQPRQQN VLPANQPTPP FPGSAPPPAP VASSSNNFSG  60
   61 QTPMFAAPLN HHPAPVMGMP VVLSIPPPPM PPASLPWNSP LFKITPLQQA PAKSNDGNQN 120
  121 DDVDNCPNFS IYSQESQAVA N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [842-960]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASAMPSGVPH GPADASDKDD DDMNEDLVQL DDDDEDTDIP LPLGPEPEPV PEKVPKSSDD  60
   61 DLYEPENPTE EPEEPEMFEE SCDAVPTEKS ESSDHEPSNS NVQAAAPEEN DAEEARTRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [961-1071]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSPLVKEDR AADRDRAKGV LELYDDSDWE ELDIDKPKEF EKALLTETEA QVSPKRAPSK  60
   61 RPPSKKDTSL ERDVNESGSE HEQDRSYTPC LDEKNLAEEE EAGTTHQNNV S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1072-1204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSPKTRSSKV SGDEDEPEKA VGTDIQSEDE LNNENESPRR SRSRGTANNK KDKSKSRSKR  60
   61 NKGETFKKVG KRQKDRNYRG DKSEPDRSPR PDSRSLTPKM RSKSPRVSKS ISRSRSGSRS 120
  121 RCKSKSFSRS RSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1205-1382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSRSRNRRR RNSRSKSYSR SHSRSRSRSN SHSRQRFSFR GRDHQRGFFR GRGGLRLNYR  60
   61 NQQFHNRPFQ HYGQNYHQNQ NYHHQHNQHQ NYFPPNQHGQ HQQYFQRPKR RELPRYDVRN 120
  121 VVGTSRHQTQ AKDRYGRDAM RSHRSRSGRR NSRSFSRSVS RDSRVSLRSR SGSPKRRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [1383-1485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSMSPTPPPG TSPPPHKHGR GRQTSTNRRY ARSPSPAPSP RNERATSPVQ SVHSRRSRSH  60
   61 TPNRINGDGN RSSLYMGSPH YTPRISRSRS RSRSKSPKDM HKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #13
Region A:
Residues: [1486-1647]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKKSDKKKR RKRTGSSSPT TAARMRRISR QRDPFEDADD FLAPQRKRKK AGITTGQWSP  60
   61 SPSPGRCDFL HDSALQDKNS SWTPPLGTPK GGHYNNDGGL TPKKTKRKRD KSKKKRKQHQ 120
  121 LEKPRKEKKR KRRTQTPEPL PSKEVFASGN NILVSVSFNK ES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #14
Region A:
Residues: [1648-1764]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTNNASATLS SQQQSVVTIP PGREDLLSNR MTSMTSMASM ASNSNICSAV GAVKKTKRKR  60
   61 KKLEAKPVAI IDLERSPFQV HQEPADVIVL TDSEDATEPL SSRRERERDR DHELMRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #15
Region A:
Residues: [1765-1962]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGQREKTPQV GSLDAIMETS YENMTQSTGP KTPPEPPLVK FNLPTKKIQH KVRNNPLHED  60
   61 VDDINSADEL EASCSMAPAE QTPQHGHASH DGGQKIGPNT PPESGPCSPD AYDPFEPTKS 120
  121 PSLSPRSPTL TPSQNLDQQT VSMPASGAIG PGSGDKGESD GAHVTGSNAS TNTQAQGNAL 180
  181 NPVDLVMALM NKPNQSGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #16
Region A:
Residues: [1963-2172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQQESEVSSA QYISSSSLSL SLGVGSSTGG GGGGAGGGDN HDKTADGKTI TVLSNVLLTS  60
   61 SSVVSSSQHI PSISSPTPPS KKLTPLPKAG GSVASSSSGV GNIPTTSSGI GGTRNGSGLG 120
  121 NAGGSSNALD DSFSMEIESP YSPGSADYED LFEPPIPLEA SRRAKGGATG GKVEIFDNLF 180
  181 GSSSPISNIR MTSRYNTAVG KKSNRTKADR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #17
Region A:
Residues: [2173-2296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSKVKGARNP DFYDDVPNSA TDLQNKDRLL RKLNRQERVV EEVKLVLKPY FNKKAITKDD  60
   61 YKDIMRRAVP KICHSRSGEI NPHKIKNLID AYVRKFRAKH KKLSLLNTGQ VSSAVKCAAY 120
  121 LKKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle