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Protein Overview: CG2926-PA

General Information:
Name(s) found: CG2926-PA / FBpp0078401 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG2926 (CG2926, FBgn0037344). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1405866..1414097. It has the cytological map location 83B2-83B4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: regulation of alternative nuclear mRNA splicing, via spliceosome. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 2296 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC]
    Biological Process: regulation of alternative nuclear mRNA splicing, via spliceosome [IMP]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRDSDAVS DAGPRLSQQR GQRNRRIIMR IEFKDSEDSA SDQDRDDRPS CSAATRLRRS  60
   61 TRRQEVASHS DSDSVPRKST RKLRNRYGPR SDCSSSGSDI DQLPTRTRKR KKVESSDEEE 120
  121 PERTPNAVGR IQPMPADPDD GFSSDISSND LLEKCPICLL TFRQQEIGTP ATCEHIFCAA 180
  181 CIDAWSRNVQ TCPIDRIEFD RIIVRDSYAS RRVVREVRLD LSKSNTELVV DDEADTAALS 240
  241 EEEVTNCEIC ESPDREDVML LCDSCNQGYH MDCLDPPLYE IPAGSWYCDN CIDSDDEDDN 300
  301 EQLELADDLD QLYEDIRGMG LPETRLRVRE VQEPPRILRT RQNERIRAAV LRRTRSGATS 360
  361 AEDSTLTRTR TRTTTTTTTT TTTTRRTTTS TKKRPVQRRR RRRTRYRTYV VEYDLNNFDE 420
  421 KFALKTSKKV IRRRRRRRRR GVATASSEGP GRRLSASKRL AEQMGVKSEG FQSSHLSGGT 480
  481 ASSFSLFGNA NDLEYFSDSE PDAVSQISSA GLGSTAVQTS VRIGSIGAPR IRKALLQGKA 540
  541 RIAAPPTAPT SAPAADILSS ILDLQDRWHD ASRNLGEVHI RADGTLNIPQ RPAPTATEAP 600
  601 LPKAGTSKTE KHLTQAPLYQ QGGGGPNYNR GGGAGSSDSY NNRYSGNTSY RGGGGGGAGG 660
  661 SSGGSGVPSS SGEASSRHLT GEGDGQGGGG FGNQNFSSSG SNNNTNMSSF IPFHLRFNTP 720
  721 TRQQQPRQQN VLPANQPTPP FPGSAPPPAP VASSSNNFSG QTPMFAAPLN HHPAPVMGMP 780
  781 VVLSIPPPPM PPASLPWNSP LFKITPLQQA PAKSNDGNQN DDVDNCPNFS IYSQESQAVA 840
  841 NASAMPSGVP HGPADASDKD DDDMNEDLVQ LDDDDEDTDI PLPLGPEPEP VPEKVPKSSD 900
  901 DDLYEPENPT EEPEEPEMFE ESCDAVPTEK SESSDHEPSN SNVQAAAPEE NDAEEARTRS 960
  961 TPSPLVKEDR AADRDRAKGV LELYDDSDWE ELDIDKPKEF EKALLTETEA QVSPKRAPSK1020
 1021 RPPSKKDTSL ERDVNESGSE HEQDRSYTPC LDEKNLAEEE EAGTTHQNNV STSPKTRSSK1080
 1081 VSGDEDEPEK AVGTDIQSED ELNNENESPR RSRSRGTANN KKDKSKSRSK RNKGETFKKV1140
 1141 GKRQKDRNYR GDKSEPDRSP RPDSRSLTPK MRSKSPRVSK SISRSRSGSR SRCKSKSFSR1200
 1201 SRSRSPSRSR NRRRRNSRSK SYSRSHSRSR SRSNSHSRQR FSFRGRDHQR GFFRGRGGLR1260
 1261 LNYRNQQFHN RPFQHYGQNY HQNQNYHHQH NQHQNYFPPN QHGQHQQYFQ RPKRRELPRY1320
 1321 DVRNVVGTSR HQTQAKDRYG RDAMRSHRSR SGRRNSRSFS RSVSRDSRVS LRSRSGSPKR1380
 1381 RSFSMSPTPP PGTSPPPHKH GRGRQTSTNR RYARSPSPAP SPRNERATSP VQSVHSRRSR1440
 1441 SHTPNRINGD GNRSSLYMGS PHYTPRISRS RSRSRSKSPK DMHKKKKKKS DKKKRRKRTG1500
 1501 SSSPTTAARM RRISRQRDPF EDADDFLAPQ RKRKKAGITT GQWSPSPSPG RCDFLHDSAL1560
 1561 QDKNSSWTPP LGTPKGGHYN NDGGLTPKKT KRKRDKSKKK RKQHQLEKPR KEKKRKRRTQ1620
 1621 TPEPLPSKEV FASGNNILVS VSFNKESNTN NASATLSSQQ QSVVTIPPGR EDLLSNRMTS1680
 1681 MTSMASMASN SNICSAVGAV KKTKRKRKKL EAKPVAIIDL ERSPFQVHQE PADVIVLTDS1740
 1741 EDATEPLSSR RERERDRDHE LMRENGQREK TPQVGSLDAI METSYENMTQ STGPKTPPEP1800
 1801 PLVKFNLPTK KIQHKVRNNP LHEDVDDINS ADELEASCSM APAEQTPQHG HASHDGGQKI1860
 1861 GPNTPPESGP CSPDAYDPFE PTKSPSLSPR SPTLTPSQNL DQQTVSMPAS GAIGPGSGDK1920
 1921 GESDGAHVTG SNASTNTQAQ GNALNPVDLV MALMNKPNQS GSIQQESEVS SAQYISSSSL1980
 1981 SLSLGVGSST GGGGGGAGGG DNHDKTADGK TITVLSNVLL TSSSVVSSSQ HIPSISSPTP2040
 2041 PSKKLTPLPK AGGSVASSSS GVGNIPTTSS GIGGTRNGSG LGNAGGSSNA LDDSFSMEIE2100
 2101 SPYSPGSADY EDLFEPPIPL EASRRAKGGA TGGKVEIFDN LFGSSSPISN IRMTSRYNTA2160
 2161 VGKKSNRTKA DRKSKVKGAR NPDFYDDVPN SATDLQNKDR LLRKLNRQER VVEEVKLVLK2220
 2221 PYFNKKAITK DDYKDIMRRA VPKICHSRSG EINPHKIKNL IDAYVRKFRA KHKKLSLLNT2280
 2281 GQVSSAVKCA AYLKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] deduced N/A No confident structure predictions are available.
    2 View Details [140..220] PSI-BLAST 8.69897 No description for 2ep4A was found.
    3 View Details [221..333] PSI-BLAST 17.30103 No description for 2e6rA was found.
    4 View Details [334..446] deduced N/A No confident structure predictions are available.
    5 View Details [447..588] deduced N/A No confident structure predictions are available.
    6 View Details [589..700] deduced N/A No confident structure predictions are available.
    7 View Details [701..841] deduced N/A No confident structure predictions are available.
    8 View Details [842..960] deduced N/A No confident structure predictions are available.
    9 View Details [961..1071] deduced N/A No confident structure predictions are available.
    10 View Details [1072..1204] deduced N/A No confident structure predictions are available.
    11 View Details [1205..1382] deduced N/A No confident structure predictions are available.
    12 View Details [1383..1485] deduced N/A No confident structure predictions are available.
    13 View Details [1486..1647] deduced N/A No confident structure predictions are available.
    14 View Details [1648..1764] deduced N/A No confident structure predictions are available.
    15 View Details [1765..1962] deduced N/A No confident structure predictions are available.
    16 View Details [1963..2172] deduced N/A No confident structure predictions are available.
    17 View Details [2173..2296] MSA 2.347993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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