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View Structure Prediction Details

Protein: Pi4KIIalpha-PB
Organism: Drosophila melanogaster
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pi4KIIalpha-PB.

Description E-value Query
Range
Subject
Range
gi|220951884 - gi|220951884|gb|ACL88485.1| Pi4KIIalpha-PA [synthetic construct]
Pi4KIIalpha-PC, ... - The gene Pi4KIIÃ?ŽÃ?± is referred to in FlyBase by the symbol Dmel\Pi4KIIÃ?ŽÃ?± (CG2929,...
651.0 [0..11] [563..143]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKNNIKSFL SQVPLPNAIA AKYQEPSEPR DDEQPTTSKD ALESSSSVPS ASAAYACICC  60
   61 EHKCPLEKDF LESQSDKEGD PPFLVNSPSM ARDSKDT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTVQIAAPRC NCANCPLRNL YDPLFSEIVA KAEGAIENGV LPERIYQGSS GSYFVKDASH  60
   61 QCLAVFKPKD EEPYGRLNPK WTKWMHKLCC PCCFGRACLI PNQGYLSESG ASLVDRKLNL 120
  121 NVVPKTRVVR LVAESF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [234-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYARIDRQKA KLKKRIKEHY PSAHFNRMSL PLKTGSFQLF VEGYKDADYW LRRFESEPLP  60
   61 PSVAKSFQLQ FERLVVLDYI IRNTDRGNDN WLIKYVAPKI TTQVGGTGGR TMHGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [349-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTPKLPNALG ASKIVDLNEP PQASPKPTTG GRPSNHLAGG AATSAQQDSS SLASSEDEPS  60
   61 SRSPPTSEPD WNVVNSAFIR IAAIDNGLAF PFKHPDSWRA YPYHWAWLPQ AKIPFSEEIK 120
  121 EQVLPQLSDM NFVEEICTEL LYLFQQDRGF DKRLFERQMS VMRGQILNLT QALRDGKSPV 180
  181 QLVQMPAVIV ERSSGSRFFS FTQRFQNKSP FFSWC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle