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View Structure Prediction Details

Protein: Pi4KIIalpha-PB
Organism: Drosophila melanogaster
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pi4KIIalpha-PB.

Description E-value Query
Range
Subject
Range
gi|220951884 - gi|220951884|gb|ACL88485.1| Pi4KIIalpha-PA [synthetic construct]
Pi4KIIalpha-PC, ... - The gene Pi4KIIÃ?ŽÃ?± is referred to in FlyBase by the symbol Dmel\Pi4KIIÃ?ŽÃ?± (CG2929,...
651.0 [0..11] [563..143]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKNNIKSFL SQVPLPNAIA AKYQEPSEPR DDEQPTTSKD ALESSSSVPS ASAAYACICC  60
   61 EHKCPLEKDF LESQSDKEGD PPFLVNSPSM ARDSKDT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTVQIAAPRC NCANCPLRNL YDPLFSEIVA KAEGAIENGV LPERIYQGSS GSYFVKDASH  60
   61 QCLAVFKPKD EEPYGRLNPK WTKWMHKLCC PCCFGRACLI PNQGYLSESG ASLVDRKLNL 120
  121 NVVPKTRVVR LVAESF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [234-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYARIDRQKA KLKKRIKEHY PSAHFNRMSL PLKTGSFQLF VEGYKDADYW LRRFESEPLP  60
   61 PSVAKSFQLQ FERLVVLDYI IRNTDRGNDN WLIKYVAPKI TTQVGGTGGR TMHGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [349-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTPKLPNALG ASKIVDLNEP PQASPKPTTG GRPSNHLAGG AATSAQQDSS SLASSEDEPS  60
   61 SRSPPTSEPD WNVVNSAFIR IAAIDNGLAF PFKHPDSWRA YPYHWAWLPQ AKIPFSEEIK 120
  121 EQVLPQLSDM NFVEEICTEL LYLFQQDRGF DKRLFERQMS VMRGQILNLT QALRDGKSPV 180
  181 QLVQMPAVIV ERSSGSRFFS FTQRFQNKSP FFSWC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle