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View Structure Prediction Details

Protein: Or83b-PB, Or83b-PA
Organism: Drosophila melanogaster
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or83b-PB, Or83b-PA.

Description E-value Query
Range
Subject
Range
gi|58383070, gi|... - gi|58383070|ref|XP_312379.2| ENSANGP00000012177 [Anopheles gambiae str. PEST], gi|55242206|gb|EAA080...
483.0 [0..5] [486..4]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSMQPSKY TGLVADLMPN IRAMKYSGLF MHNFTGGSAF MKKVYSSVHL VFLLMQFTFI  60
   61 LVNMALNAEE VNELSGNTIT TLFFTHCITK FIYLAVNQKN FYRTLNIWNQ VNTHPLFAES 120
  121 DARYHSIALA KMRKLFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVMLTTVASA TAWTTITFFG DSVKMVVDHE TNSSIPVEIP RLPIKSFYPW NASHGMFYMI  60
   61 SFAFQIYYVL FSMIHSNLCD VMFCSWLIFA CEQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [231-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQHLKGIMKP LMELSASLDT YRPNSAALFR SLSANSKSEL IHNEEKDPGT DMDMSGIYSS  60
   61 KADWGAQFRA PSTLQSFGGN GGGGNGLVNG ANPNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [326-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTKKQEMMVR SAIKYWVERH KHVVRLVAAI GDTYGAALLL HMLTSTIKLT LLAYQATKIN  60
   61 GVNVYAFTVV GYLGYALAQV FHFCIFGNRL IEESSSVMEA AYSCHWYDGS EEAKTFVQIV 120
  121 CQQCQKAMSI SGAKFFTVSL DLFASVLGAV VTYFMVLVQL K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle