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View Structure Prediction Details

Protein: Or83b-PB, Or83b-PA
Organism: Drosophila melanogaster
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or83b-PB, Or83b-PA.

Description E-value Query
Range
Subject
Range
gi|58383070, gi|... - gi|58383070|ref|XP_312379.2| ENSANGP00000012177 [Anopheles gambiae str. PEST], gi|55242206|gb|EAA080...
483.0 [0..5] [486..4]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSMQPSKY TGLVADLMPN IRAMKYSGLF MHNFTGGSAF MKKVYSSVHL VFLLMQFTFI  60
   61 LVNMALNAEE VNELSGNTIT TLFFTHCITK FIYLAVNQKN FYRTLNIWNQ VNTHPLFAES 120
  121 DARYHSIALA KMRKLFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVMLTTVASA TAWTTITFFG DSVKMVVDHE TNSSIPVEIP RLPIKSFYPW NASHGMFYMI  60
   61 SFAFQIYYVL FSMIHSNLCD VMFCSWLIFA CEQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [231-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQHLKGIMKP LMELSASLDT YRPNSAALFR SLSANSKSEL IHNEEKDPGT DMDMSGIYSS  60
   61 KADWGAQFRA PSTLQSFGGN GGGGNGLVNG ANPNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [326-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTKKQEMMVR SAIKYWVERH KHVVRLVAAI GDTYGAALLL HMLTSTIKLT LLAYQATKIN  60
   61 GVNVYAFTVV GYLGYALAQV FHFCIFGNRL IEESSSVMEA AYSCHWYDGS EEAKTFVQIV 120
  121 CQQCQKAMSI SGAKFFTVSL DLFASVLGAV VTYFMVLVQL K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle