| Protein: | cno-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1882 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cno-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
1382.0 | [0..1] | [1882..1] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MSHDKKMLDR EAVRSVIQQW NANRLDLFAL SEPDENLLFH GVMRFYFQDA GQKVATKCIR 60
61 VASDATVTDV IDTLIEKFRP DMRMLSVPNY ALYEVHANGE ERRLNADEKP LLVQLNWHID 120
121 DREGRFLLKN IDQKTTPIEQ TDLNFKRKLS KREKKEQKKK EKMAKLSS
|
| Detection Method: |  |
| Confidence: | 2.4 |
| Match: | 1wxaA |
| Description: | Solution Structure of Ras-binding Domain in Mouse AF-6 Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0155013961187369 | bayes_pls_golite062009 |
|
Region A: Residues: [169-254] |
1 11 21 31 41 51
| | | | | |
1 DPPTSNGSHL GLGNGVGASS GSAHMNGNAG GTGGDSSDAV AGKLYTELPE TSFTRSISNP 60
61 EAVMRRRRQQ KLEKKLQQFR SRDGGP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [255-370] |
1 11 21 31 41 51
| | | | | |
1 DTGGTLKIYG ESLCQDVPYK TLLLSIRDCA QAVVREMLTK YGLEKADPLH YCLVQVNSDG 60
61 TEYILDDDEC PLSILMNHPT SRGSIMFHVR RRPADSQPRR RKKKPLGAAN GANHIS
|
| Detection Method: | |
| Confidence: | 30.045757 |
| Match: | 1wxaA |
| Description: | Solution Structure of Ras-binding Domain in Mouse AF-6 Protein |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [371-455] |
1 11 21 31 41 51
| | | | | |
1 GDREGPVLVE VTHSGDGGRR IKLGSDPVEV GSANTNCLQL FGPSIQPRHC LISLLEGVCT 60
61 VTPLHTDALT FVNGHHISQP TILHN
|
| Detection Method: | |
| Confidence: | 31.39794 |
| Match: | 1wlnA |
| Description: | Solution structure of the FHA domain of mouse Afadin 6 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.962970280214435 | bayes_pls_golite062009 |
| protein binding | 0.56456434217804 | bayes_pls_golite062009 |
|
Region A: Residues: [456-806] |
1 11 21 31 41 51
| | | | | |
1 GSVVMFGRVA SYRFLDSPTD GRYNLALSQS QLDSACLYER YRASTHYRPE LQPTERAHKL 60
61 TMFLHHVANL VYSVVQEQYT DPRILAFWMA NSSEFLHFLK SDRHISAFSV QAQEVLAEAV 120
121 QTAFRNLVNC FRLELSQTLN QFLSENIDHD SAAGLVLTVL GSAMALLRRC RVNAALTIQL 180
181 FSQLFHYINV ICFNTIVANS QMCTGDWGKV MTERLQLLEL WAERQGLELA ADCHLAKINQ 240
241 CAQFLQAPKS SVEEIQQLAC SCFRLNSLQM AALLQQEKLP RNLVDTAIRM AESVADELTR 300
301 ADGREVRLEE SPELHLALLL PDDGFSCDVV RGIPTGLVDF LNPLQQQGMC R
|
| Detection Method: | |
| Confidence: | 44.0 |
| Match: | 2f6hX |
| Description: | Myosin V cargo binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [807-915] |
1 11 21 31 41 51
| | | | | |
1 LAAQPTSIGL WTVYMHQFNA RSSSAMSNKL PQPELQLIKL HKNSNGMGLS IVAAKGAGQE 60
61 KLGIYIKSVV PGGAADADGR LQAGDQLLRV DGQSLIGITQ ERAADYLVR
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 1xz9A |
| Description: | Structure of AF-6 PDZ domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.566291652083235 | bayes_pls_golite062009 |
| protein binding | 0.52823753548825 | bayes_pls_golite062009 |
|
Region A: Residues: [916-1882] |
1 11 21 31 41 51
| | | | | |
1 TGPVVSLEVA KQGAIYHGLA TLLQQPSPVI QRGNRRMSER DLTRMGGAES TKSLGPLIAN 60
61 NHPNHSLSLS QHLNNSHNNT LGNSNNSSII NPLAAHLPNS KSVPALHHHT GSGTISLANS 120
121 KSRSTHSLHN NTSGMGGIGG AAAGGMLGQP NGSQNNANGN GNGNEQGFYQ NLSVYRAQNQ 180
181 SQPILNERPP IAAHAAMNAY NGSSPLAPQQ QPQQQQQSPY QQQQQQQHMQ ANANLPPTRP 240
241 VSAYYHSQQS AQQQLQQQQQ QQQQHSLQQQ QFALSSGNLN GQQQQQQQHQ HQHQLTLNNR 300
301 TKSQQNFQHT LRMQQMMAPS MPNISNMYHH QQQQQQQLPL QQQQQQQQQP LMSSSQSMQN 360
361 VNDFAGGYQN GSLEYRRSQL HDPSTLYEIQ QQQLQQQQQQ QQQQQQQQQA SPNFIALPPK 420
421 PLGSLQSPNK PNVPPSTAPK PQQDKPPLPP TATHPLFKAT QQIAPGMNYV ASTLDPPKGS 480
481 YVASNQGNNR PLHSGSNPWE REEREKDLEM RREHIRQWRE QQISELSQIV SRSPMQEEQL 540
541 KTLILERDFE RRAQELQEQE EQDQEQQYDK ENVQELFRLA GGGQVSAIQT PITSYRQTEI 600
601 KLAEMPDSNS LVDSVPPQPP APTAQPLSSN TQQPKSILKH NRYSEGGVGP SGAPSSPSKS 660
661 QKSASFADER HLHTEHPISN LAKELNQLTM LDKDNNNETL DAVVPPPPPP ERNSSYLIMS 720
721 QQKLRGSTGN ATSSMGLLKT ATSNQAAAAV EIKKASLLNT QTNNNNNLSG SLNNNTMHGS 780
781 PLSAMELNAA YVSATGTGII GGLGTPPPPP PLMQRDNKRV SFHDEENNFV SGNSQQQQLQ 840
841 QQYIMDNYGM EHQDLDTIRE DTSYLQHNLD ASMLPSMPAT PDAALWNTSV QSTPGVIGAQ 900
901 EVYRDPRTRR LAEKQQQQQQ QRAGDAVPEK LSFKEKMKMF ALESGEDKTP KDKLKISRAQ 960
961 RDIDAVH
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
