| Protein: | cno-PE |
| Organism: | Drosophila melanogaster |
| Length: | 2051 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cno-PE.
| Description | E-value | Query Range |
Subject Range |
|
|
1461.0 | [0..1] | [2051..1] |
|
Region A: Residues: [1-244] |
1 11 21 31 41 51
| | | | | |
1 MSHDKKMLDR EAVRSVIQQW NANRLDLFAL SEPDENLLFH GVMRFYFQDA GQKVATKCIR 60
61 VASDATVTDV IDTLIEKFRP DMRMLSVPNY ALYEVHANGE ERRLNADEKP LLVQLNWHID 120
121 DREGRFLLKN IDQKTTPIEQ TDLNFKRKLS KREKKEQKKK EKMAKLSSDP PTSNGSHLGL 180
181 GNGVGASSGS AHMNGNAGGT GGDSSDAVAG KLYTELPETS FTRSISNPEA VMRRRRQQKL 240
241 EKKL
|
| Detection Method: |  |
| Confidence: | 40.0 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [245-345] |
1 11 21 31 41 51
| | | | | |
1 QQFRSRDGGP DTGGTLKIYG ESLCQDVPYK TLLLSIRDCA QAVVREMLTK YGLEKADPLH 60
61 YCLVQVNSDG TEYILDDDEC PLSILMNHPT SRGSIMFHVR R
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1wxaA |
| Description: | Solution Structure of Ras-binding Domain in Mouse AF-6 Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [346-537] |
1 11 21 31 41 51
| | | | | |
1 RPADSQPRRR KKKPLGAANG ANHISGDREG PVLVEVTHSG DGGRRIKLGS DPVEVGSANT 60
61 NCLQLFGPSI QPRHCLISLL EGVCTVTPLH TDALTFVNGH HISQPTILHN GSVVMFGRVA 120
121 SYRFLDSPTD GRYNLALSQS QLDSACLYES RSPTSPGSWN DEDGALSSTH KSDYDHHQQA 180
181 NHSSAYHNNN NN
|
| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 1wlnA |
| Description: | Solution structure of the FHA domain of mouse Afadin 6 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.962970280214435 | bayes_pls_golite062009 |
| protein binding | 0.56456434217804 | bayes_pls_golite062009 |
|
Region A: Residues: [538-595] |
1 11 21 31 41 51
| | | | | |
1 SSDHPLSSTL RDVVDSKAGQ DQGANSGNYD GQSLEGNLEN ETKSISSLKS GGSNSQDR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [596-977] |
1 11 21 31 41 51
| | | | | |
1 SPKMTGSGIL AGGGSGSGDT QGQEPILPAV LEFPETHQEL FLRHIISELD VNVPHFKLAP 60
61 VYSLYLCARY RASTHYRPEL QPTERAHKLT MFLHHVANLV YSVVQEQYTD PRILAFWMAN 120
121 SSEFLHFLKS DRHISAFSVQ AQEVLAEAVQ TAFRNLVNCF RLELSQTLNQ FLSENIDHDS 180
181 AAGLVLTVLG SAMALLRRCR VNAALTIQLF SQLFHYINVI CFNTIVANSQ MCTGDWGKVM 240
241 TERLQLLELW AERQGLELAA DCHLAKINQC AQFLQAPKSS VEEIQQLACS CFRLNSLQMA 300
301 ALLQQEKLPR NLVDTAIRMA ESVADELTRA DGREVRLEES PELHLALLLP DDGFSCDVVR 360
361 GIPTGLVDFL NPLQQQGMCR LA
|
| Detection Method: | |
| Confidence: | 48.30103 |
| Match: | 2f6hX |
| Description: | Myosin V cargo binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [978-1112] |
1 11 21 31 41 51
| | | | | |
1 AQPTSIGLWT VYMHQFNARS SSAMSNKLPQ PELQLIKLHK NSNGMGLSIV AAKGAGQEKL 60
61 GIYIKSVVPG GAADADGRLQ AGDQLLRVDG QSLIGITQER AADYLVRTGP VVSLEVAKQG 120
121 AIYHGLATLL QQPSP
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 1xz9A |
| Description: | Structure of AF-6 PDZ domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.566291652083235 | bayes_pls_golite062009 |
| protein binding | 0.52823753548825 | bayes_pls_golite062009 |
|
Region A: Residues: [1113-2051] |
1 11 21 31 41 51
| | | | | |
1 VIQRGNRRMS ERDLTRMGGA ESTKSLGPLI ANNHPNHSLS LSQHLNNSHN NTLGNSNNSS 60
61 IINPLAAHLP NSKSVPALHH HTGSGTISLA NSKSRSTHSL HNNTSGMGGI GGAAAGGMLG 120
121 QPNGSQNNAN GNGNGNEQGF YQNLSVYRAQ NQSQPILNER PPIAAHAAMN AYNGSSPLAP 180
181 QQQPQQQQQS PYQQQQQQQH MQANANLPPT RPVSAYYHSQ QSAQQQLQQQ QQQQQQHSLQ 240
241 QQQFALSSGN LNGQQQQQQQ HQHQHQLTLN NRTKSQQNFQ HTLRMQQMMA PSMPNISNMY 300
301 HHQQQQQQQL PLQQQQQQQQ QPLMSSSQSM QNVNDFAGGY QNGSLEYRRS QLHDPSTLYE 360
361 IQQQQLQQQQ QQQQQQQQQQ QASPNFIALP PKPLGSLQSP NKPNVPPSTA PKPQQDKPPL 420
421 PPTATHPLFK ATQQIAPGMN YVASTLDPPK GSYVASNQGN NRPLHSGSNP WEREEREKDL 480
481 EMRREHIRQW REQQISELSQ IVSRSPMQEE QLKTLILERD FERRAQELQE QEEQDQEQQY 540
541 DKENVQELFR LAGGGQVSAI QTPITSYRQT EIKLAEMPDS NSLVDSVPPQ PPAPTAQPLS 600
601 SNTQQPKSIL KHNRYSEGGV GPSGAPSSPS KSQKSASFAD ERHLHTEHPI SNLAKELNQL 660
661 TMLDKDNNNE TLDAVVPPPP PPERNSSYLI MSQQKLRGST GNATSSMGLL KTATSNQAAA 720
721 AVEIKKASLL NTQTNNNNNL SGSLNNNTMH GSPLSAMELN AAYVSATGTG IIGGLGTPPP 780
781 PPPLMQRDNK RVSFHDEENN FVSGNSQQQQ LQQQYIMDNY GMEHQDLDTI REDTSYLQHN 840
841 LDASMLPSMP ATPDAALWNT SVQSTPGVIG AQEVYRDPRT RRLAEKQQQQ QQQRAGDAVP 900
901 EKLSFKEKMK MFALESGEDK TPKDKLKISR AQRDIDAVH
|
| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
