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View Structure Prediction Details

Protein: laf-PA
Organism: Drosophila melanogaster
Length: 753 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for laf-PA.

Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRHGQHYIS ARSVSAKDLD DSESGGDKSK SKERVRNLVL KKVCRGRNVQ DSPGYRGKAM  60
   61 LNCSNRTRKY SKHSKDNLHS GNEDGGMPKD TEYISSDHDD SPSWSQQSLL SSDRSKSYSQ 120
  121 ICSEILEESK ERQEKAECAF RVYNINRSKL RRSHQQSLSR GPGSGSYGSS MASEYSSKSE 180
  181 AGYQDYDSPS TDPSREHVQM ANVANIDKWT RPKQFKVESY KMEIKERPNY RKTQEVSHSY 240
  241 SCPLESRISK GSLVTRHRAR SCVCAQESSA CSLCTAHSRS GKHHSEGCDA EVIDGPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [298-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPVDCRSDIP TTATSQSRSQ RDYLSSCCTR HRHHPHYHRQ RSVPKTYQDR GNSPINIKTR  60
   61 RKTRDYQEPH FAFRTEKVEA AVQLSRSSAS IGVQYPSQDE NADWTDWT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [406-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDTTQGDRQF KGHDGDCLRS TEKKRSISNE QSPITLRNTN AKDVDIPDCF GSFAMNKHLS  60
   61 VITEDASQHH KDPDEDMIDS QLSNSVLLET YDEGEKYAYS YQYSYKPEIC NNNQFVSDES 120
  121 DLKVSSKEGY QMDQEDYVMD KQELVHEGGS DASLSEVAKS KSFLSLKIYD ADEALMEIPE 180
  181 DFEGPAIVLD DDADFLDITL TDDEEKIRAK LMAAALTTRK TTSSISPNIS LRTRSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [642-753]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEPSSLSYKP NVIFTRRSEV IKDNYTPRPD DRVALLAEKF LQSFSESAPN DYGWKPSKQE  60
   61 VTSAVSISHL FNENGVTRRG GDTPLCGDRQ LLSVEFNRKL QRQLKVIVES FQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle