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View Structure Prediction Details

Protein: hkb-PA
Organism: Drosophila melanogaster
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hkb-PA.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
359.0 [0..2] [296..2543]
gi|114626840 - gi|114626840|ref|XP_528435.2| PREDICTED: zinc finger protein 79 (pT7) [Pan troglodytes]
325.0 [0..5] [297..389]
gi|76644053 - gi|76644053|ref|XP_592867.2| PREDICTED: similar to zinc finger protein 287 [Bos taurus]
323.0 [0..8] [296..725]
gi|109113439, gi... - gi|109113439|ref|XP_001087082.1| PREDICTED: similar to zinc finger protein 287 isoform 3 [Macaca mul...
311.0 [0..8] [296..393]
ZNF287 - zinc finger protein 287
310.0 [0..8] [296..393]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTINLHPPQ TYSRLFRPWD TQRQAATSAA PRTVKQEPEA ITIKTELASS SFGHDCDGDF  60
   61 SSASSSASSS SNSSKSCYEE ALNHSSYTRT STPLLDAAPH PVFSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQSSPLDTHA AATASLAPPN QHAPFLSAAS DLYYAAAAAA AAAASTPTAV PGFGMDPFTM  60
   61 GLMEQEYARV MAEDAQLKAL NSRKQRPKKF KCPNCDVAFS NNGQLKGHIR IHTGERPFKC 120
  121 DVNTCGKTFT RNEELTRHKR IHTGLRPYPC SACGKKFGRR DHLKKHMKTH MPQERQLGPS 180
  181 IFVPMYSYLY GY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle