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View Structure Prediction Details

Protein: CG9772-PC
Organism: Drosophila melanogaster
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9772-PC.

Description E-value Query
Range
Subject
Range
CG9772-PA, FBpp0... - This gene is referred to in FlyBase by the symbol Dmel\CG9772 (CG9772, FBgn0037236). It is a protein...
254.0 [0..1] [312..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRKHRGSE NMENLCPVTR KRSTNKNHVS VVGALVSTTK SSHYEHPSSP SALTFEALEE  60
   61 MGIGMLDSEE SSSSALSAIA LAVSATSDDN SNETTPCASV SRMAHQLQHT QRLSLGSTGD 120
  121 ITLDSPAVED SLSMSRQSAE KLQILAQAKR SSLGSEGSGN SNSPSKRLRN PLAAVTCNNQ 180
  181 IDGTASLNFQ PSTSRLAQVR QAKKPSTTNI TTRIVAADSF FVFRTPAMSA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [231-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HINSGINYFE RLSDEILLDI FKWLPKKTLL RMATVCRRFN RCSRDETLWT RLDLGLRTIR  60
   61 PGALEQIVRR GVLVIRLAQT SVSYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

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