| Protein: | CG9772-PA, FBpp0... |
| Organism: | Drosophila melanogaster |
| Length: | 559 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9772-PA, FBpp0....
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..10] | [556..79] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSSRKHRGSE NMENLCPVTR KRSTNKNHVS VVGALVSTTK SSHYEHPSSP SALTFEALEE 60
61 MGIGMLDSEE SSSSALSAIA LAVSATSDDN SNETTPCASV SRMAHQLQHT QR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-453] |
1 11 21 31 41 51
| | | | | |
1 LSLGSTGDIT LDSPAVEDSL SMSRQSAEKL QILAQAKRSS LGSEGSGNSN SPSKRLRNPL 60
61 AAVTCNNQID GTASLNFQPS TSRLAQVRQA KKPSTTNITT RIVAADSFFV FRTPAMSAHI 120
121 NSGINYFERL SDEILLDIFK WLPKKTLLRM ATVCRRFNRC SRDETLWTRL DLGLRTIRPG 180
181 ALEQIVRRGV LVIRLAQTSI QEPAFAPYTE VFRTRLQYLD LSMASITRSS LLTLLSHCRQ 240
241 LKKISLENIE LDDDICAEIA KNEALEAVNL TMASGLTSNS VRLMMESLTS LSSLNISWTD 300
301 LSADAVTALV THISPNLIRL NIAGCRRVLF DSHVATLQKR C
|
| Detection Method: | |
| Confidence: | 7.154902 |
| Match: | 1g9uA |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.23313855731605 | bayes_pls_golite062009 |
| nucleic acid binding | 0.710443686489925 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| receptor activity | 0.269916678721535 | bayes_pls_golite062009 |
|
Region A: Residues: [454-559] |
1 11 21 31 41 51
| | | | | |
1 PQLLELDLSD CNSLTPTVIT AIMKFKMLEY LSVSRCYLIP ATKFIELKSM PSLTYLDIFG 60
61 MLSDTAMEVL EKQLPKMGIN KFIHSSVSRP TVGTRRTSIW GLRTRD
|
| Detection Method: | |
| Confidence: | 22.221849 |
| Match: | 1fqvA |
| Description: | Skp2; Cyclin A/CDK2-associated p19, Skp2 |
Matching Structure (courtesy of the PDB): |
|
