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View Structure Prediction Details

Protein: Cpr78E-PA
Organism: Drosophila melanogaster
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr78E-PA.

Description E-value Query
Range
Subject
Range
gi|91079648 - gi|91079648|ref|XP_968350.1| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium cast...
144.0 [0..31] [132..78]
gi|108881215, gi... - gi|157135292|ref|XP_001656586.1| pupal cuticle protein 78E, putative [Aedes aegypti], gi|108881215|g...
143.0 [0..2] [136..1]
gi|125808726, gi... - gi|54636022|gb|EAL25425.1| GA15602-PA [Drosophila pseudoobscura], gi|125808726|ref|XP_001360850.1| G...
138.0 [0..5] [136..60]
gi|119114027, gi... - gi|119114027|ref|XP_318997.3| ENSANGP00000014755 [Anopheles gambiae str. PEST], gi|116118219|gb|EAA1...
138.0 [0..28] [125..121]
CU17_BOMMO - Larval cuticle protein LCP-17 OS=Bombyx mori GN=LCP17 PE=2 SV=1
134.0 [0..2] [137..1]
gi|45445693, gi|... - gi|45552587|ref|NP_995817.1| cuticular protein 47Ef, isoform B [Drosophila melanogaster], gi|4544569...
132.0 [0..19] [125..119]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKILIVALS LCTAVVLSAP VDHVTSTTQP PVAILESSHE KHEDGSYNFS YLGEDGTHRR  60
   61 EEAVVRNQGT ENEYLEISGS YSYFDANGQE VTVTYKADDH GFVPEGGAIL PQISLAAKQV 120
  121 SEQVPQPDLD YAKPPKV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.356547
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.516 N/A N/A b.12.1 Lipase/lipooxygenase domain (PLAT/LH2 domain)
View Download 0.437 N/A N/A b.61.1 Avidin/streptavidin
View Download 0.427 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.419 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.418 N/A N/A b.40.4 Nucleic acid-binding proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle