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View Structure Prediction Details

Protein: CG10419-PA, FBpp...
Organism: Drosophila melanogaster
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10419-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|27819903 - gi|27819903|gb|AAL39848.2| LD47479p [Drosophila melanogaster]
337.0 [0..1] [245..22]
GEMI2_MOUSE - Gem-associated protein 2 OS=Mus musculus GN=Gemin2 PE=2 SV=1
314.0 [0..6] [243..11]
gi|156717376, gi... - gi|156717376|ref|NP_001096228.1| hypothetical protein LOC100124782 [Xenopus (Silurana) tropicalis], ...
313.0 [0..1] [243..1]
GEMI2_XENLA - Gem-associated protein 2 OS=Xenopus laevis GN=gemin2 PE=2 SV=1
307.0 [0..9] [243..1]
gi|55640643 - gi|55640643|ref|XP_509917.1| PREDICTED: SMN-interacting protein 1 isoform 5 [Pan troglodytes]
SIP1 - survival of motor neuron protein interacting protein 1
301.0 [0..6] [243..22]
gi|109083413 - gi|109083413|ref|XP_001092707.1| PREDICTED: similar to SMN-interacting protein 1 isoform alpha isofo...
gi|11182456 - gi|11182456|emb|CAC16117.2| survival interacting protein 1 [Homo sapiens]
300.0 [0..6] [243..11]
GEMI2_RAT - Gem-associated protein 2 OS=Rattus norvegicus GN=Gemin2 PE=2 SV=1
295.0 [0..6] [243..11]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHEPEDQTF QLQALEICEP DSSFDPQKPP ESGEEYLMHM FYERKRCPAV VTKRSSKIRN  60
   61 NTGNTTLEML DNPELPPFKC LLPTPEWRDE QVKSFQAARS QVLVLRKELA NNNYDQSGEP 120
  121 PLTS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.371 a.118.8 TPR-like
View Download 0.331 d.82.2 Frataxin-like
View Download 0.311 d.218.1 Nucleotidyltransferase
View Download 0.271 a.7.7 BAG domain
View Download 0.262 d.129.2 Phosphoglucomutase, C-terminal domain

Predicted Domain #2
Region A:
Residues: [125-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQEKWKEFCR NQQPLLSTLL HLTQNDLELL LEMLSKWLQD PNTTVDLLHD VWLARWLYAT  60
   61 LVCLHLPLEP HVFSTLRYIA RTCIHLRNQL KEDEVQRAAP YNLLLTLTVQ VFAQNDFKDY 120
  121 I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.830 N/A N/A a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.739 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.675 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.648 N/A N/A a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.640 N/A N/A a.29.2 Bromodomain


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