| Protein: | Syx8-PA |
| Organism: | Drosophila melanogaster |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syx8-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
154.0 | [0..8] | [231..126] |
|
|
144.0 | [0..7] | [215..38] |
|
|
142.0 | [0..7] | [231..41] |
|
|
141.0 | [0..10] | [218..171] |
|
|
139.0 | [0..7] | [231..2] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MALVDHDSWD IEYEGCERLR HQLLVYLNQR QQLNPRTSQF VQLTSSIQTG IEQLAKDMKH 60
61 LKVVLDNAIT WETSPEEELQ QRRIDWDRLT SQLREIREKF ANSSRSNVPA ASGSAWQDQD 120
121 LGPGHSNSSR NTALDVEALK QKKTEMLAQQ NEGLEVLSAT LSRQRQLATQ LGNEVEDQNN 180
181 ILDNLANAMD RVETGVQRET QSIGQVNRRD STWGYWLVII ALFVAIIVVV FV
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| binding | 2.56277612413299 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| protein binding | 1.51700626946713 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| protein transporter activity | 1.09007120264887 | bayes_pls_golite062009 |
| SNARE binding | 0.71459772253941 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
