YRC Public Data Repository - Protein Structure Prediction

Protein:	Hsp22-PB, Hsp22-PA
Organism:	Drosophila melanogaster
Length:	174 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hsp22-PB, Hsp22-PA.

Description	E-value	Query Range	Subject Range
gi\|13124733 - gi\|13124733\|sp\|P02515\|HSP22_DROME Heat shock protein 22	135.0	[0..1]	[174..1]
gi\|8671873 - gi\|8671873\|gb\|AAF78436.1\|AC018748_15 Contains similarity to 17.6 KD class I heat shock protein from ...	132.0	[0..1]	[151..247]
gi\|118786648, gi... - gi\|118786648\|ref\|XP_315549.3\| ENSANGP00000017610 [Anopheles gambiae str. PEST], gi\|116126423\|gb\|EAA1...	128.0	[0..1]	[174..1]
gi\|229516, gi\|71455 - pir\|\|CYMQAA alpha-crystallin chain A - rhesus macaque (tentative sequence), gi\|229516\|prf\|\|751000B ...	127.0	[0..5]	[165..8]
gi\|23308655, gi\|... - gi\|52789217\|gb\|AAH83177.1\| Crystallin, alpha A [Danio rerio], gi\|23308655\|ref\|NP_694482.1\| crystalli...	127.0	[0..5]	[158..8]
gi\|10946519 - gi\|10946519\|gb\|AAG23866.1\| alpha-A crystallin [Clarias fuscus]	126.0	[0..5]	[165..8]

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Predicted Domain #1

Region A:
Residues: [1-174]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLPMFWRM AEEMARMPRL SSPFHAFFHE PPVWSVALPR NWQQIARWQE QEFAPPATVN  60
   61 KDGYKLTLDV KDYSELKVKV LDESVVLVEG KSEQQEAEQG GYSSRHFLRR FVLPEGYEAD 120
  121 KVTSTLSSDG VLTISVPNPP GVQETLKERE VTIEQTGEPA KKSAEEPNDK AASQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	11.30103
Match:	2bolA
Description:	CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits