YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG13711-PA
Organism: Drosophila melanogaster
Length: 127 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13711-PA.

Description E-value Query
Range
Subject
Range
CG15876-PA - This gene is referred to in FlyBase by the symbol Dmel\CG15876 (CG15876, FBgn0035569). It is a prote...
137.0 [0..23] [119..2]
gi|54645360, gi|... - gi|54645360|gb|EAL34100.1| GA20343-PA [Drosophila pseudoobscura], gi|125986541|ref|XP_001357034.1| G...
120.0 [0..30] [121..13]
gi|33329019 - gi|33329019|gb|AAQ09916.1| CG14112 [Drosophila yakuba]
101.0 [0..31] [115..19]

Back

Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRYQKLINE CDSKPAKNAG QQEQQQHCYQ QQPKGTPNVG YHLYLYRQQL SQKNVEYMRL  60
   61 SKAKYFITDT LLAKTVRNLK GYSADELKTV NHQIVFRHKL RRQIQRLRKL RSLGIKNANP 120
  121 KMESTEL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.508638
Match: PF05306.2
Description: No description for PF05306.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.779 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.766 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.766 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.725 N/A N/A a.29.16 Description not found.
View Download 0.678 N/A N/A a.216.1 Description not found.
View Download 0.642 N/A N/A a.7.16 Description not found.
View Download 0.550 N/A N/A a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.529 N/A N/A a.25.1 Ferritin-like
View Download 0.528 N/A N/A a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle