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View Structure Prediction Details

Protein: CG13711-PA
Organism: Drosophila melanogaster
Length: 127 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13711-PA.

Description E-value Query
Range
Subject
Range
CG15876-PA - This gene is referred to in FlyBase by the symbol Dmel\CG15876 (CG15876, FBgn0035569). It is a prote...
137.0 [0..23] [119..2]
gi|54645360, gi|... - gi|54645360|gb|EAL34100.1| GA20343-PA [Drosophila pseudoobscura], gi|125986541|ref|XP_001357034.1| G...
120.0 [0..30] [121..13]
gi|33329019 - gi|33329019|gb|AAQ09916.1| CG14112 [Drosophila yakuba]
101.0 [0..31] [115..19]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRYQKLINE CDSKPAKNAG QQEQQQHCYQ QQPKGTPNVG YHLYLYRQQL SQKNVEYMRL  60
   61 SKAKYFITDT LLAKTVRNLK GYSADELKTV NHQIVFRHKL RRQIQRLRKL RSLGIKNANP 120
  121 KMESTEL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.508638
Match: PF05306.2
Description: No description for PF05306.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle