YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24657492, gi\|...
Organism:	Drosophila melanogaster
Length:	158 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24657492, gi|....

Description	E-value	Query Range	Subject Range
gi\|114189489, gi... - gi\|115433000\|ref\|XP_001216637.1\| hypothetical protein ATEG_08016 [Aspergillus terreus NIH2624], gi\|1...	132.0	[0..4]	[158..51]
gi\|70984896, gi\|... - gi\|70984896\|ref\|XP_747954.1\| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus fumigatu... gi\|159126120 - gi\|159126120\|gb\|EDP51236.1\| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus fumigatus...	130.0	[0..22]	[158..61]
gi\|90301489, gi\|... - gi\|90301489\|gb\|EAS31120.1\| hypothetical protein CIMG_06599 [Coccidioides immitis RS], gi\|119183289\|r...	128.0	[0..21]	[158..74]
gi\|220691677, gi... - gi\|238503267\|ref\|XP_002382867.1\| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus flav... gi\|169776557 - gi\|169776557\|ref\|XP_001822745.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83771480 - gi\|83771480\|dbj\|BAE61612.1\| unnamed protein product [Aspergillus oryzae]	127.0	[0..25]	[158..73]
gi\|42552211, gi\|... - gi\|46123469\|ref\|XP_386288.1\| hypothetical protein FG06112.1 [Gibberella zeae PH-1], gi\|42552211\|gb\|E...	126.0	[0..18]	[158..48]
orf19.336, orf19... - YAH1 CGDID:CAL0004752 Assembly 19, Contig19-10046 (191133, 190522) CDS, reverse complemented, transl... gi\|46442019, gi\|... - gi\|68471976\|ref\|XP_720031.1\| hypothetical protein CaO19.336 [Candida albicans SC5314], gi\|68471715\|r...	125.0	[0..1]	[156..46]
ADRX_YEAST - Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAH1 ... gi\|151942550 - gi\|151942550\|gb\|EDN60896.1\| adrenodoxin-like protein [Saccharomyces cerevisiae YJM789] YAH1 - Ferredoxin of the mitochondrial matrix required for formation of cellular iron-sulfur proteins; invo...	122.0	[0..28]	[156..42]
gi\|32416044, gi\|... - gi\|32416044\|ref\|XP_328500.1\| hypothetical protein [Neurospora crassa], gi\|28919405\|gb\|EAA28849.1\| hy... gi\|85089735 - gi\|85089735\|ref\|XP_958085.1\| hypothetical protein NCU07794 [Neurospora crassa OR74A]	120.0	[0..29]	[158..60]
gi\|116198879, gi... - gi\|88178874\|gb\|EAQ86342.1\| hypothetical protein CHGG_07595 [Chaetomium globosum CBS 148.51], gi\|1161...	119.0	[0..24]	[158..63]
etp1 - mitochondrial type I [2Fe-2S] ferredoxin Etp1 / cytochrome oxidase cofactor Cox15, fusion gi\|19115748 - gi\|19115748\|ref\|NP_594836.1\| mitochondrial type I [2Fe-2S] ferredoxin Etp1/ cytochrome oxidase cofac...	118.0	[0..31]	[156..503]

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Predicted Domain #1

Region A:
Residues: [1-158]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSCLQIGAT QPQFAIADRN AYFLDGIGPE NERCVSIFST PRALQCVNIT FVRANGDKIK  60
   61 TSGKVGDSLL DVVVNNNVDL DGFGACEGTL TCSTCHLIFK TSDFEKLPDK PGDEELDMLD 120
  121 LAYELTDTSR LGCQITLSKD MEGLEVHVPS TINDARAA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.0
Match:	1l6uA
Description:	Adrenodoxin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
electron carrier activity	0.977024239198829	bayes_pls_golite062009
oxidoreductase activity	0.12689037681325	bayes_pls_golite062009
binding	0.084952480336813	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: