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View Structure Prediction Details

Protein: CG3829-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 597 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3829-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|54635447, gi|... - gi|54635447|gb|EAL24850.1| GA17715 [Drosophila pseudoobscura pseudoobscura], gi|125807124|ref|XP_001...
gi|195149487, gi... - gi|195149487|ref|XP_002015689.1| GL11204 [Drosophila persimilis], gi|194109536|gb|EDW31579.1| GL1120...
gi|54635447|gb|E... - GA17715-PA [Drosophila pseudoobscura], GA17715 [Drosophila pseudoobscura pseudoobscura]
629.0 [0..1] [584..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHTKDAEMS MPARQESDRT SAPSVTKSLT LNSTRSGVGT GNFGGYGMTN GAEKPSVLHM  60
   61 IMEALGLRNQ AQNRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTSKDIGTLI MLGVMFLLFV ISVTGFFVMW FTEYYNNTIL ENLILAENSD TANSWLNPDP  60
   61 KYDTLLKAHI FHYPNIDDYL AGRADKIKVV DVGPLTYQEH TVKDEVSFNK NFTVSFR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRKSYKFLPE KSSIGEHEVV RVPNVPLISA AGPVKRMKAF ERLAVSTWIK QFKEPLFKNL  60
   61 TVSEYLWGYE DSIIKLKSLG RGRRRFGLLM SRNGTSVDSV QLNTGEDDIT KFSIITQFNG 120
  121 MPQLDYWEGD ECNRIDGS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [331-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPSMFSPHLL QDRSTVNVFL QVLCRKVPLH FEKEVTIYND IDVLRYRTPM DVFSHPSKNP  60
   61 ANQCYCQNTE LCLPSGVINA TKCYGD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [417-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APIFPSFPHF FTGDPVLYQD FEGIEPDAAV HQTYADIHPR FGFPISGASR VQINIMLDKT  60
   61 PILRNQGDRL KNTTILPLMW IEITSGDFSE EVLHTLYLST FGLNAIQQTL KYGTLLISVT 120
  121 SFSLIVAGVY YLNSRREQQL QESKTSAELE ALNGGENVIV VHHIDMPVPL PVQDGGIHQG 180
  181 T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle