| Protein: | Pof-PB, Pof-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 495 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pof-PB, Pof-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..59] | [495..3] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MDSKRAALES GDGPDAKRLD TTDDQDKEAS GGDGSQVMLA KHVAPYTGHG CTPPMESYLF 60
61 EPTPAGSQLL PWKTSVDLDN DAELEKPTSD KKPDTAKLS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [100-428] |
1 11 21 31 41 51
| | | | | |
1 RRELAKMRRE HTLRALALER ELTNKPGQTP ASEVLLVRFP DPEITAPMLA GLSKDIRDVV 60
61 LPISVAPRYC LVHLKAGADV EATICDINRV RFGTGHLRAE LKPFSDEEQA EFIDPCSLYV 120
121 GNIPFNMTTS AIKAYFANAM RVDIGVLKRE KRARYAFVRY ASPDQTMEAF KELVDSPLNS 180
181 RTLTVRYRRL RKRAGMPMVQ CATSFQALQS PNGDDDNTDC KVISPPPLES IIISDSDNCS 240
241 DSSGNGKEDG KRKKKINEQE REIEKLKRQM AEYGAIIKSL QFRQNSLEDT FIPDLTPKVE 300
301 PSVNPTGCLL GSNAVHLMRD IKKECDYLG
|
| Detection Method: | |
| Confidence: | 19.154902 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 1.86107895330648 | bayes_pls_golite062009 |
| nucleic acid binding | 1.24926911925075 | bayes_pls_golite062009 |
| RNA binding | 0.869777833004299 | bayes_pls_golite062009 |
| protein binding | 0.0101134374085809 | bayes_pls_golite062009 |
|
Region A: Residues: [429-495] |
1 11 21 31 41 51
| | | | | |
1 IPDPVPATKP TTQAQDDSQK KAKRSCFGRL FTGPFRRGTS AMKTADEYEK DDRLEELYAQ 60
61 LERDPDP
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
|
